RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 TMEM145Q8NBT3 493 aa17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 BBS4Q96RK4 519 aa17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 MGLLQ99685 303 aa17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 IRF2BPLQ9H1B7 796 aa17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 SLC6A20Q9NP91 592 aa17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 MRPS30Q9NP92 439 aaKnown RBP17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 ADAM29Q9UKF5 820 aa17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 ATG4BQ9Y4P1 393 aa17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 MDC1Q14676 2089 aaKnown RBP17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 DOCK8Q8NF50 2099 aa17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 HYAL2Q12891 473 aa17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 TSTQ16762 297 aaKnown RBP17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 PUS10Q3MIT2 529 aaKnown RBP17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 FBXO43Q4G163 708 aa17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 CDONQ4KMG0 1287 aa17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 SLX4IPQ5VYV7 408 aa17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 PGBD2Q6P3X8 592 aa17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 YAF2Q8IY57 180 aa17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 CCDC116Q8IYX3 515 aa17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 PITHD1Q9GZP4 211 aaPredicted RBP17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 ANKRA2Q9H9E1 313 aa17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 SPHK1Q9NYA1 384 aa17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 TAS2R7Q9NYW3 318 aa17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 FBXW2Q9UKT8 454 aa17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 A4GNTQ9UNA3 340 aa17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 SPEF1Q9Y4P9 236 aa17.31■□□□□ 0.36
CHRFAM7A-202ENST00000397827 SH3D21A4FU49 640 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 EFCAB10A6NFE3 127 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 MAN2B1O00754 1011 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 NME6O75414 186 aaPredicted RBP17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 KRT8P05787 483 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 TNNI3P19429 210 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 SGCGQ13326 291 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 LASP1Q14847 261 aaKnown RBP17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 SLC9A5Q14940 896 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 DUSP6Q16828 381 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 TJAP1Q5JTD0 557 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 KIAA1211LQ6NV74 962 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 OR14C36Q8NHC7 312 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 CDADC1Q9BWV3 514 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 CDCA4Q9BXL8 241 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 MKRN2Q9H000 416 aaKnown RBP17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 QRSL1Q9H0R6 528 aaKnown RBP17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 POLR2J3Q9H1A7 115 aaKnown RBP17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 MGAT4BQ9UQ53 548 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 USP34Q70CQ2 3546 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 A0A1W2PR48 441 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 MPZL2O60487 215 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 C5AR1P21730 350 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 PKLRP30613 574 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 CASP3P42574 277 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 XKP51811 444 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 UGT2B15P54855 530 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 RAB8AP61006 207 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 ILKQ13418 452 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 C18orf63Q68DL7 685 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 PLAG1Q6DJT9 500 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 TBC1D19Q8N5T2 526 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 IQCF1Q8N6M8 205 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 LSMEM1Q8N8F7 131 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 MS4A6EQ96DS6 147 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 CRELD1Q96HD1 420 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 RPP25Q9BUL9 199 aaKnown RBP17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 OR2B2Q9GZK3 357 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 BTBD1Q9H0C5 482 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 MMP27Q9H306 513 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 CPNE5Q9HCH3 593 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 SCN3AQ9NY46 2000 aa17.3■□□□□ 0.36
CHRFAM7A-202ENST00000397827 A0A1W2PQU0 124 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 FAAHO00519 579 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 UGT2B17O75795 530 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 DLGAP3O95886 979 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 APODP05090 189 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 CKMT1AP12532 417 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 DRD2P14416 443 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 EN2P19622 333 aaPredicted RBP17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 PPP5CP53041 499 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 SNAP47Q5SQN1 464 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 ACOT4Q8N9L9 421 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 CNRIP1Q96F85 164 aaPredicted RBP17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 TRMT61BQ9BVS5 477 aaKnown RBP17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 TRPV4Q9HBA0 871 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 ABCB10Q9NRK6 738 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 GIMAP4Q9NUV9 329 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 FBXL12Q9NXK8 326 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 OBP2AQ9NY56 170 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 CNOT2Q9NZN8 540 aaKnown RBP17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 CLEC2DQ9UHP7 191 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 EPPINO95925 133 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 DNTTP04053 509 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 HMGN2P05204 90 aaKnown RBP17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 CHRM4P08173 479 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 CD40LGP29965 261 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 GDI1P31150 447 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 FUT5Q11128 374 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 MLC1Q15049 377 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 PODNL1Q6PEZ8 512 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 ZNF367Q7RTV3 350 aa17.29■□□□□ 0.36
CHRFAM7A-202ENST00000397827 AMER2Q8N7J2 671 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms