RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 GPR75O95800 540 aa12.39□□□□□ -0.43
SEC13-209ENST00000397117 FHP07954 510 aa12.39□□□□□ -0.43
SEC13-209ENST00000397117 PPIBP23284 216 aaKnown RBP12.39□□□□□ -0.43
SEC13-209ENST00000397117 ME2P23368 584 aa12.39□□□□□ -0.43
SEC13-209ENST00000397117 PTPN6P29350 595 aa12.39□□□□□ -0.43
SEC13-209ENST00000397117 CHI3L1P36222 383 aaPredicted RBP12.39□□□□□ -0.43
SEC13-209ENST00000397117 ELF3P78545 371 aaPredicted RBP12.39□□□□□ -0.43
SEC13-209ENST00000397117 FOLH1Q04609 750 aa12.39□□□□□ -0.43
SEC13-209ENST00000397117 SLC13A2Q13183 592 aa12.39□□□□□ -0.43
SEC13-209ENST00000397117 SPATS1Q496A3 300 aa12.39□□□□□ -0.43
SEC13-209ENST00000397117 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.39□□□□□ -0.43
SEC13-209ENST00000397117 PIGGQ5H8A4 983 aa12.39□□□□□ -0.43
SEC13-209ENST00000397117 FHL5Q5TD97 284 aa12.39□□□□□ -0.43
SEC13-209ENST00000397117 ZNF551Q7Z340 670 aaPredicted RBP12.39□□□□□ -0.43
SEC13-209ENST00000397117 HPS6Q86YV9 775 aa12.39□□□□□ -0.43
SEC13-209ENST00000397117 OR4N5Q8IXE1 308 aa12.39□□□□□ -0.43
SEC13-209ENST00000397117 MSRB3Q8IXL7 192 aa12.39□□□□□ -0.43
SEC13-209ENST00000397117 LRRC25Q8N386 305 aaPredicted RBP12.39□□□□□ -0.43
SEC13-209ENST00000397117 CCDC124Q96CT7 223 aaKnown RBP12.39□□□□□ -0.43
SEC13-209ENST00000397117 AURKBQ96GD4 344 aaPredicted RBP12.39□□□□□ -0.43
SEC13-209ENST00000397117 PHF12Q96QT6 1004 aa12.39□□□□□ -0.43
SEC13-209ENST00000397117 GLIPR2Q9H4G4 154 aa12.39□□□□□ -0.43
SEC13-209ENST00000397117 SEMA3GQ9NS98 782 aa12.39□□□□□ -0.43
SEC13-209ENST00000397117 CMTM6Q9NX76 183 aa12.39□□□□□ -0.43
SEC13-209ENST00000397117 CORO2BQ9UQ03 480 aa12.39□□□□□ -0.43
SEC13-209ENST00000397117 CLIC1O00299 241 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 NME4O00746 187 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 DNAJA2O60884 412 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 LDB3O75112 727 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 CDC123O75794 336 aaPredicted RBP12.38□□□□□ -0.43
SEC13-209ENST00000397117 AGFG2O95081 481 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 TIAF1O95411 115 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 CPMP14384 443 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 PORP16435 677 aaPredicted RBP12.38□□□□□ -0.43
SEC13-209ENST00000397117 TCN1P20061 433 aaPredicted RBP12.38□□□□□ -0.43
SEC13-209ENST00000397117 IL10P22301 178 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 UQCRC2P22695 453 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 ID2Q02363 134 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 LIPEQ05469 1076 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 STX4Q12846 297 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 DNASE1L3Q13609 305 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 CEACAM7Q14002 265 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 CEBPEQ15744 281 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 ZNF750Q32MQ0 723 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 PGM2L1Q6PCE3 622 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 ANGPTL8Q6UXH0 198 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 TMEM52Q8NDY8 209 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.38□□□□□ -0.43
SEC13-209ENST00000397117 ZNF681Q96N22 645 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 OR1F2PQ96R84 312 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 CPPED1Q9BRF8 314 aaPredicted RBP12.38□□□□□ -0.43
SEC13-209ENST00000397117 SLC35A5Q9BS91 424 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 ALG2Q9H553 416 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 TPT1P8Q9HAU6 139 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 PRTFDC1Q9NRG1 225 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 SLC7A8Q9UHI5 535 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 PADI1Q9ULC6 663 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 ERVK-11Q9UQG0 969 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 CROCCQ5TZA2 2017 aa12.38□□□□□ -0.43
SEC13-209ENST00000397117 PRORSD1PA6NEY8 169 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 TTLL8A6PVC2 850 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 FGF17O60258 216 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 CTNSO60931 367 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 CPNE3O75131 537 aaKnown RBP12.37□□□□□ -0.43
SEC13-209ENST00000397117 KRT75O95678 551 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 CCNYL3P0C7X3 344 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 HOXB9P17482 250 aaPredicted RBP12.37□□□□□ -0.43
SEC13-209ENST00000397117 EEFSECP57772 596 aaKnown RBP12.37□□□□□ -0.43
SEC13-209ENST00000397117 DCDP81605 110 aaKnown RBP12.37□□□□□ -0.43
SEC13-209ENST00000397117 GAB1Q13480 694 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 SELPLGQ14242 412 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 MFSD4BQ5TF39 518 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 C1orf146Q5VVC0 180 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 IFNEQ86WN2 208 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 SHISA5Q8N114 240 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 FAM13CQ8NE31 585 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 OR5AK3PQ8NH89 298 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 SSC4DQ8WTU2 575 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 CT55Q8WUE5 264 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 KCTD14Q9BQ13 255 aaPredicted RBP12.37□□□□□ -0.43
SEC13-209ENST00000397117 DPH2Q9BQC3 489 aaPredicted RBP12.37□□□□□ -0.43
SEC13-209ENST00000397117 CXorf36Q9H7Y0 433 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 MKKSQ9NPJ1 570 aaPredicted RBP12.37□□□□□ -0.43
SEC13-209ENST00000397117 RNF103-CHMP3A0A140T963 221 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 OR10H2O60403 315 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 SEMA7AO75326 666 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 DNAJB5O75953 348 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 STAMBPO95630 424 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 RNF224P0DH78 156 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 AGXTP21549 392 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 CCT3P49368 545 aaKnown RBP12.37□□□□□ -0.43
SEC13-209ENST00000397117 CDK9P50750 372 aaKnown RBP12.37□□□□□ -0.43
SEC13-209ENST00000397117 HSD17B7P56937 341 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 MINDY4Q4G0A6 757 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 NKAIN1Q4KMZ8 207 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 BHLHB9Q6PI77 547 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 SZRD1Q7Z422 152 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 NET1Q7Z628 596 aaPredicted RBP12.37□□□□□ -0.43
SEC13-209ENST00000397117 CLEC4FQ8N1N0 589 aa12.37□□□□□ -0.43
SEC13-209ENST00000397117 SLC38A9Q8NBW4 561 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms