RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 ABHD13Q7L211 337 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 VN1R5Q7Z5H4 357 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 FAM9CQ8IZT9 166 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 HORMAD2Q8N7B1 307 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 OR52N2Q8NGI0 321 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 SDCCAG3Q96C92 435 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 ERP27Q96DN0 273 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 DEFB126Q9BYW3 111 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 NMUR2Q9GZQ4 415 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 ENKD1Q9H0I2 346 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 DEPPQ9NTK1 212 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 HCFC1P51610 2035 aa9.59□□□□□ -0.87
NEDD8-202ENST00000396828 NIPBLQ6KC79 2804 aaeCLIP9.59□□□□□ -0.87
NEDD8-202ENST00000396828 SPG11Q96JI7 2443 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 ITPR3Q14573 2671 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 A0A0G2JMM0 328 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 A0A1W2PPB8 328 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 A0A1W2PRS3 328 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 LRIT2A6NDA9 550 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 URADA6NGE7 173 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 KIR3DP1A8MWS1 328 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 E9PLN8 166 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 SLC22A2O15244 555 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 PEX1O43933 1283 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 CDC40O60508 579 aaKnown RBP eCLIP9.58□□□□□ -0.88
NEDD8-202ENST00000396828 ZNF354AO60765 605 aaPredicted RBP9.58□□□□□ -0.88
NEDD8-202ENST00000396828 ITGA10O75578 1167 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 PDE9AO76083 593 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 SEMA3DO95025 777 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 RNH1P13489 461 aaKnown RBP9.58□□□□□ -0.88
NEDD8-202ENST00000396828 ADSLP30566 484 aaPredicted RBP9.58□□□□□ -0.88
NEDD8-202ENST00000396828 ATP4BP51164 291 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 STXBP1P61764 594 aaKnown RBP9.58□□□□□ -0.88
NEDD8-202ENST00000396828 TGM3Q08188 693 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 TESK1Q15569 626 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 RFTN2Q52LD8 501 aaPredicted RBP9.58□□□□□ -0.88
NEDD8-202ENST00000396828 IL23RQ5VWK5 629 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 KHDRBS2Q5VWX1 349 aaKnown RBP9.58□□□□□ -0.88
NEDD8-202ENST00000396828 TMEM198Q66K66 360 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 PAGE2Q7Z2X7 111 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 CLNKQ7Z7G1 428 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 CD163Q86VB7 1156 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 SCUBE1Q8IWY4 988 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 RNF175Q8N4F7 328 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 FITM2Q8N6M3 262 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 ZNF321PQ8N8H1 164 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 FAM98AQ8NCA5 519 aaKnown RBP9.58□□□□□ -0.88
NEDD8-202ENST00000396828 SRFBP1Q8NEF9 429 aaKnown RBP9.58□□□□□ -0.88
NEDD8-202ENST00000396828 B3GNT7Q8NFL0 401 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 FAM57AQ8TBR7 257 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 PHF10Q8WUB8 498 aaKnown RBP9.58□□□□□ -0.88
NEDD8-202ENST00000396828 NCLNQ969V3 563 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 QRFPRQ96P65 431 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 CSF3RQ99062 836 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 VKORC1Q9BQB6 163 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 MS4A8Q9BY19 250 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 UCK2Q9BZX2 261 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 MYLK2Q9H1R3 596 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 OR51B5Q9H339 312 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 SAR1AQ9NR31 198 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 PNO1Q9NRX1 252 aaKnown RBP9.58□□□□□ -0.88
NEDD8-202ENST00000396828 ASIC5Q9NY37 505 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 KCMF1Q9P0J7 381 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 GIMAP2Q9UG22 337 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 FBXW2Q9UKT8 454 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 MED13LQ71F56 2210 aa9.58□□□□□ -0.88
NEDD8-202ENST00000396828 NKX2-6A6NCS4 301 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 PSMD12O00232 456 aaPredicted RBP9.57□□□□□ -0.88
NEDD8-202ENST00000396828 PRRG2O14669 202 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 TFECO14948 347 aaPredicted RBP9.57□□□□□ -0.88
NEDD8-202ENST00000396828 SH3BGRLO75368 114 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 TPOP07202 933 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 PRPS2P11908 318 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 PTGS2P35354 604 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 CLCN2P51788 898 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 ARFIP1P53367 373 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 TLE4Q04727 773 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 ZSCAN26Q16670 478 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 DEPDC1Q5TB30 811 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 C6orf89Q6UWU4 347 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 MEX3BQ6ZN04 569 aaKnown RBP9.57□□□□□ -0.88
NEDD8-202ENST00000396828 CCDC121Q6ZUS5 278 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 CYP4Z2PQ8N1L4 340 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 MIER2Q8N344 545 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 METTL4Q8N3J2 472 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 C1orf52Q8N6N3 182 aaKnown RBP9.57□□□□□ -0.88
NEDD8-202ENST00000396828 FAM47BQ8NA70 645 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 ZFP62Q8NB50 900 aaPredicted RBP9.57□□□□□ -0.88
NEDD8-202ENST00000396828 C16orf52Q8NHV5 167 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 CA5BP1Q8WTZ4 195 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 CHTF18Q8WVB6 975 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 TMEM125Q96AQ2 219 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 RGMAQ96B86 450 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 MS4A6EQ96DS6 147 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 APIPQ96GX9 242 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 MARK4Q96L34 752 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 SPOCK3Q9BQ16 436 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 TREX2Q9BQ50 279 aaPredicted RBP9.57□□□□□ -0.88
NEDD8-202ENST00000396828 C1orf50Q9BV19 199 aa9.57□□□□□ -0.88
NEDD8-202ENST00000396828 MRPL1Q9BYD6 325 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms