RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 C7orf72A4D263 438 aa16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 CLIC1O00299 241 aa16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 HAT1O14929 419 aa16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 LCMT2O60294 686 aaKnown RBP16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 SEMA7AO75326 666 aa16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 RAP2AP10114 183 aa16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 IL1RNP18510 177 aa16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 BCL6P41182 706 aa16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 PDK3Q15120 406 aa16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 DEFB110Q30KQ9 67 aa16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 ADPRMQ3LIE5 342 aa16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 C4orf17Q53FE4 359 aa16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 ZNF385BQ569K4 471 aa16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 ANKRD26P1Q6NSI1 321 aa16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 FIGLAQ6QHK4 219 aa16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 R3HCC1LQ7Z5L2 792 aaKnown RBP16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 VPS37AQ8NEZ2 397 aa16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 SSC4DQ8WTU2 575 aa16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 FIG4Q92562 907 aa16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 C17orf62Q9BQA9 187 aa16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 TBCDQ9BTW9 1192 aa16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 CHID1Q9BWS9 393 aa16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 SLAMF7Q9NQ25 335 aa16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 PLEKHB1Q9UF11 243 aaPredicted RBP16.38■□□□□ 0.21
TNFSF13-205ENST00000396545 MYO9AB2RTY4 2548 aa16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 C1orf226A1L170 272 aa16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 LRIT2A6NDA9 550 aa16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 A6NHS1 94 aa16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 EVPLLA8MZ36 301 aa16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 NDUFS4O43181 175 aa16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 TPST1O60507 370 aa16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 SMNDC1O75940 238 aaKnown RBP eCLIP16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 OTX2P32243 289 aa16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 STXBP1P61764 594 aaKnown RBP16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 TRA2BP62995 288 aaKnown RBP16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 RGS1Q08116 209 aa16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 FAM98BQ52LJ0 330 aaKnown RBP16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 TMEM154Q6P9G4 183 aa16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 UGT2A3Q6UWM9 527 aa16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 ZBTB49Q6ZSB9 765 aa16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 GOT1L1Q8NHS2 421 aaPredicted RBP16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 IP6K3Q96PC2 410 aa16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 C9orf16Q9BUW7 83 aa16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 ZNF717Q9BY31 904 aaPredicted RBP16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 UGT2B28Q9BY64 529 aa16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 SPRTNQ9H040 489 aaPredicted RBP16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 DCAF13Q9NV06 445 aaKnown RBP16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 HEATR5BQ9P2D3 2071 aa16.37■□□□□ 0.21
TNFSF13-205ENST00000396545 SNRNP200O75643 2136 aaKnown RBP16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 ARHGAP10A1A4S6 786 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 URADA6NGE7 173 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 SAP18O00422 153 aaKnown RBP16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 PLPP1O14494 284 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 SOCS2O14508 198 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 TXNDC9O14530 226 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 ACOX3O15254 700 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 ZSCAN9O15535 394 aaPredicted RBP16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 PRSS23O95084 383 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 LDLRP01130 860 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 CTSBP07858 339 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 UBTFL6P0CB48 400 aaPredicted RBP16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 RNF224P0DH78 156 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 HOXB6P17509 224 aaKnown RBP16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 PPIBP23284 216 aaKnown RBP16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 TPP2P29144 1249 aaPredicted RBP16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 CLCN2P51788 898 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 RAPSNQ13702 412 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 SSPNQ14714 243 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 C1orf189Q5VU69 101 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 HIST2H2BCQ6DN03 193 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 NUDT13Q86X67 352 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 NATD1Q8N6N6 113 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 SEPHS2Q99611 448 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 SPATA9Q9BWV2 254 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 OSBPL11Q9BXB4 747 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 MAGIXQ9H6Y5 334 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 DDX31Q9H8H2 851 aaKnown RBP16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 ATAD3AQ9NVI7 634 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 C5AR2Q9P296 337 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 ZNF639Q9UID6 485 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 SCOCQ9UIL1 159 aa16.36■□□□□ 0.21
TNFSF13-205ENST00000396545 CRYBG3Q68DQ2 2970 aa16.35■□□□□ 0.21
TNFSF13-205ENST00000396545 CPSF4O95639 269 aaKnown RBP16.35■□□□□ 0.21
TNFSF13-205ENST00000396545 KLK1P06870 262 aa16.35■□□□□ 0.21
TNFSF13-205ENST00000396545 MAGP20916 626 aa16.35■□□□□ 0.21
TNFSF13-205ENST00000396545 DCDP81605 110 aaKnown RBP16.35■□□□□ 0.21
TNFSF13-205ENST00000396545 CHRNB3Q05901 458 aa16.35■□□□□ 0.21
TNFSF13-205ENST00000396545 MRPL49Q13405 166 aaKnown RBP16.35■□□□□ 0.21
TNFSF13-205ENST00000396545 NRF1Q16656 503 aa16.35■□□□□ 0.21
TNFSF13-205ENST00000396545 DCAF10Q5QP82 559 aa16.35■□□□□ 0.21
TNFSF13-205ENST00000396545 C6orf52Q5T4I8 152 aa16.35■□□□□ 0.21
TNFSF13-205ENST00000396545 MLIPQ5VWP3 458 aa16.35■□□□□ 0.21
TNFSF13-205ENST00000396545 ERICH5Q6P6B1 374 aa16.35■□□□□ 0.21
TNFSF13-205ENST00000396545 ZNF621Q6ZSS3 439 aa16.35■□□□□ 0.21
TNFSF13-205ENST00000396545 ZZZ3Q8IYH5 903 aa16.35■□□□□ 0.21
TNFSF13-205ENST00000396545 ZNF655Q8N720 491 aaPredicted RBP16.35■□□□□ 0.21
TNFSF13-205ENST00000396545 FAM86B1Q8N7N1 296 aa16.35■□□□□ 0.21
TNFSF13-205ENST00000396545 CAMKVQ8NCB2 501 aa16.35■□□□□ 0.21
TNFSF13-205ENST00000396545 OR2L5Q8NG80 312 aa16.35■□□□□ 0.21
TNFSF13-205ENST00000396545 OR2Y1Q8NGV0 311 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms