RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 LIPJQ5W064 366 aa16.24■□□□□ 0.19
SREBF1-203ENST00000395751 CES4AQ5XG92 561 aa16.24■□□□□ 0.19
SREBF1-203ENST00000395751 KCTD20Q7Z5Y7 419 aa16.24■□□□□ 0.19
SREBF1-203ENST00000395751 TMCO2Q7Z6W1 182 aaPredicted RBP16.24■□□□□ 0.19
SREBF1-203ENST00000395751 CNTN4Q8IWV2 1026 aa16.24■□□□□ 0.19
SREBF1-203ENST00000395751 TRIB3Q96RU7 358 aa16.24■□□□□ 0.19
SREBF1-203ENST00000395751 MCHR1Q99705 422 aa16.24■□□□□ 0.19
SREBF1-203ENST00000395751 TTTY10Q9BZA0 68 aa16.24■□□□□ 0.19
SREBF1-203ENST00000395751 TXNL4BQ9NX01 149 aaKnown RBP16.24■□□□□ 0.19
SREBF1-203ENST00000395751 GPR52Q9Y2T5 361 aa16.24■□□□□ 0.19
SREBF1-203ENST00000395751 CXCL11O14625 94 aa16.24■□□□□ 0.19
SREBF1-203ENST00000395751 ALPIP09923 528 aa16.24■□□□□ 0.19
SREBF1-203ENST00000395751 JUNDP17535 347 aa16.24■□□□□ 0.19
SREBF1-203ENST00000395751 S100PP25815 95 aa16.24■□□□□ 0.19
SREBF1-203ENST00000395751 RBMS1P29558 406 aaKnown RBP16.24■□□□□ 0.19
SREBF1-203ENST00000395751 RPS19P39019 145 aaKnown RBP16.24■□□□□ 0.19
SREBF1-203ENST00000395751 ACTBP60709 375 aa16.24■□□□□ 0.19
SREBF1-203ENST00000395751 ACTG1P63261 375 aa16.24■□□□□ 0.19
SREBF1-203ENST00000395751 PCBP2Q15366 365 aaKnown RBP eCLIP16.24■□□□□ 0.196e-8■■■■□ 21.3
SREBF1-203ENST00000395751 ABCA11PQ4W5N1 156 aa16.24■□□□□ 0.19
SREBF1-203ENST00000395751 TCEAL5Q5H9L2 206 aa16.24■□□□□ 0.19
SREBF1-203ENST00000395751 NPWQ8N729 165 aa16.24■□□□□ 0.19
SREBF1-203ENST00000395751 PXT1Q8NFP0 134 aa16.24■□□□□ 0.19
SREBF1-203ENST00000395751 OR52N2Q8NGI0 321 aa16.24■□□□□ 0.19
SREBF1-203ENST00000395751 ZNF563Q8TA94 476 aa16.24■□□□□ 0.19
SREBF1-203ENST00000395751 SETD7Q8WTS6 366 aaKnown RBP16.24■□□□□ 0.19
SREBF1-203ENST00000395751 PRELID3BQ9Y3B1 194 aa16.24■□□□□ 0.19
SREBF1-203ENST00000395751 RBM7Q9Y580 266 aaKnown RBP16.24■□□□□ 0.19
SREBF1-203ENST00000395751 PCDHGA6Q9Y5G7 932 aa16.24■□□□□ 0.19
SREBF1-203ENST00000395751 HMGB3O15347 200 aaKnown RBP16.23■□□□□ 0.19
SREBF1-203ENST00000395751 ZNF821O75541 412 aaPredicted RBP16.23■□□□□ 0.19
SREBF1-203ENST00000395751 S100A8P05109 93 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 ADRB1P08588 477 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 HSD3B1P14060 373 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 ARSAP15289 507 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 HSD3B2P26439 372 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 CAMK2BQ13554 666 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 POM121L1PQ3SYA9 428 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 ATXN7L2Q5T6C5 722 aaPredicted RBP16.23■□□□□ 0.19
SREBF1-203ENST00000395751 AGTRAPQ6RW13 159 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 OR6V1Q8N148 313 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 COX18Q8N8Q8 333 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 KCTD12Q96CX2 325 aaKnown RBP16.23■□□□□ 0.19
SREBF1-203ENST00000395751 GPRC5BQ9NZH0 403 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 BAZ2AQ9UIF9 1905 aaKnown RBP16.23■□□□□ 0.19
SREBF1-203ENST00000395751 MAFKO60675 156 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 AGR2O95994 175 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 CAV3P56539 151 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 WNT7BP56706 349 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 GPLD1P80108 840 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 SGCGQ13326 291 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 PUM1Q14671 1186 aaKnown RBP eCLIP16.23■□□□□ 0.191e-7■■■■□ 20.6
SREBF1-203ENST00000395751 RGNQ15493 299 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 TAF1CQ15572 869 aaPredicted RBP16.23■□□□□ 0.19
SREBF1-203ENST00000395751 FAM189A2Q15884 450 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 AANATQ16613 207 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 SMOC2Q9H3U7 446 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 CD84Q9UIB8 345 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 ZNF175Q9Y473 711 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 GXYLT2A0PJZ3 443 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 ZDHHC11BP0C7U3 371 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 GIMD1P0DJR0 217 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 DDX6P26196 483 aaKnown RBP eCLIP16.23■□□□□ 0.191e-7■■■■■ 60
SREBF1-203ENST00000395751 TM4SF1P30408 202 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 SLC6A6P31641 620 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 WDR5P61964 334 aaKnown RBP16.23■□□□□ 0.19
SREBF1-203ENST00000395751 CYCSP99999 105 aaKnown RBP16.23■□□□□ 0.19
SREBF1-203ENST00000395751 SP140Q13342 867 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 ZNF674Q2M3X9 581 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 NAGSQ8N159 534 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 PPTC7Q8NI37 304 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 SLC2A13Q96QE2 648 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 RIOK2Q9BVS4 552 aaKnown RBP16.23■□□□□ 0.19
SREBF1-203ENST00000395751 SLC27A6Q9Y2P4 619 aa16.23■□□□□ 0.19
SREBF1-203ENST00000395751 A0A0D9SG52 128 aa16.22■□□□□ 0.19
SREBF1-203ENST00000395751 TEX13DA0A0J9YY54 714 aaPredicted RBP16.22■□□□□ 0.19
SREBF1-203ENST00000395751 ACOT7O00154 380 aa16.22■□□□□ 0.19
SREBF1-203ENST00000395751 ZNF254O75437 659 aa16.22■□□□□ 0.19
SREBF1-203ENST00000395751 PSMB1P20618 241 aaKnown RBP16.22■□□□□ 0.19
SREBF1-203ENST00000395751 NT5EP21589 574 aa16.22■□□□□ 0.19
SREBF1-203ENST00000395751 TUBG1P23258 451 aa16.22■□□□□ 0.19
SREBF1-203ENST00000395751 TIA1P31483 386 aaKnown RBP eCLIP16.22■□□□□ 0.19
SREBF1-203ENST00000395751 LRRC32Q14392 662 aa16.22■□□□□ 0.19
SREBF1-203ENST00000395751 PLK5Q496M5 336 aa16.22■□□□□ 0.19
SREBF1-203ENST00000395751 FAM46CQ5VWP2 391 aa16.22■□□□□ 0.19
SREBF1-203ENST00000395751 RGMBQ6NW40 437 aa16.22■□□□□ 0.19
SREBF1-203ENST00000395751 LYPD4Q6UWN0 246 aa16.22■□□□□ 0.19
SREBF1-203ENST00000395751 PAQR8Q8TEZ7 354 aa16.22■□□□□ 0.19
SREBF1-203ENST00000395751 SAP130Q9H0E3 1048 aa16.22■□□□□ 0.19
SREBF1-203ENST00000395751 RENP00797 406 aa16.22■□□□□ 0.19
SREBF1-203ENST00000395751 LAMP1P11279 417 aa16.22■□□□□ 0.19
SREBF1-203ENST00000395751 SPNP16150 400 aa16.22■□□□□ 0.19
SREBF1-203ENST00000395751 PCGF2P35227 344 aa16.22■□□□□ 0.19
SREBF1-203ENST00000395751 MRPS6P82932 125 aaKnown RBP16.22■□□□□ 0.19
SREBF1-203ENST00000395751 UBXN11Q5T124 520 aa16.22■□□□□ 0.19
SREBF1-203ENST00000395751 ADGRF3Q8IZF5 1079 aa16.22■□□□□ 0.19
SREBF1-203ENST00000395751 YIPF6Q96EC8 236 aa16.22■□□□□ 0.19
SREBF1-203ENST00000395751 CRB3Q9BUF7 120 aa16.22■□□□□ 0.19
SREBF1-203ENST00000395751 KCNJ16Q9NPI9 418 aa16.22■□□□□ 0.19
SREBF1-203ENST00000395751 HYKKA2RU49 373 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms