RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 SOBPA7XYQ1 873 aa14.99□□□□□ -0.01
SMARCD1-202ENST00000394963 ZNF99A8MXY4 864 aaPredicted RBP14.99□□□□□ -0.01
SMARCD1-202ENST00000394963 MYL12BO14950 172 aa14.99□□□□□ -0.01
SMARCD1-202ENST00000394963 KHNYNO15037 678 aaKnown RBP14.99□□□□□ -0.01
SMARCD1-202ENST00000394963 ANXA8P13928 327 aa14.99□□□□□ -0.01
SMARCD1-202ENST00000394963 MLLT3P42568 568 aaPredicted RBP14.99□□□□□ -0.01
SMARCD1-202ENST00000394963 SERPINB10P48595 397 aa14.99□□□□□ -0.01
SMARCD1-202ENST00000394963 SLC9A3P48764 834 aa14.99□□□□□ -0.01
SMARCD1-202ENST00000394963 BLKP51451 505 aa14.99□□□□□ -0.01
SMARCD1-202ENST00000394963 MTAPQ13126 283 aa14.99□□□□□ -0.01
SMARCD1-202ENST00000394963 ABHD13Q7L211 337 aa14.99□□□□□ -0.01
SMARCD1-202ENST00000394963 APLFQ8IW19 511 aaPredicted RBP14.99□□□□□ -0.01
SMARCD1-202ENST00000394963 SPARTQ8N0X7 666 aa14.99□□□□□ -0.01
SMARCD1-202ENST00000394963 CHCHD4Q8N4Q1 142 aa14.99□□□□□ -0.01
SMARCD1-202ENST00000394963 MCHR1Q99705 422 aa14.99□□□□□ -0.01
SMARCD1-202ENST00000394963 ABCB10Q9NRK6 738 aa14.99□□□□□ -0.01
SMARCD1-202ENST00000394963 TBC1D23Q9NUY8 699 aa14.99□□□□□ -0.01
SMARCD1-202ENST00000394963 GPATCH2Q9NW75 528 aa14.99□□□□□ -0.01
SMARCD1-202ENST00000394963 UPK1AO00322 258 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 CRHBPP24387 322 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 PKLRP30613 574 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 EIF2DP41214 584 aaKnown RBP14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 GSTM5P46439 218 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 HLCSP50747 726 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 SH3BGRP55822 239 aaPredicted RBP14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 REEP5Q00765 189 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 VEZF1Q14119 521 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 TMEM64Q6YI46 380 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 P2RY8Q86VZ1 359 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 PEX5LQ8IYB4 626 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 GPR135Q8IZ08 494 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 OR9Q1Q8NGQ5 310 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 TEX47Q8TBZ9 253 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 COQ8BQ96D53 544 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 FAM46AQ96IP4 442 aaKnown RBP14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 ZNF347Q96SE7 839 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 MBOAT4Q96T53 435 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 SPATA5L1Q9BVQ7 753 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 PREBQ9HCU5 417 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 ST6GAL1P15907 406 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 CLK3P49761 638 aaKnown RBP14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 PPP2R2BQ00005 443 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 DCTN2Q13561 401 aaKnown RBP14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 PTCRAQ6ISU1 281 aaPredicted RBP14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 LRRC25Q8N386 305 aaPredicted RBP14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 OR4K5Q8NGD3 323 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 DPYSL5Q9BPU6 564 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 C1GALT1Q9NS00 363 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 DHCR7Q9UBM7 475 aaKnown RBP14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 ENPP4Q9Y6X5 453 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 TPRP12270 2363 aaKnown RBP14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 PRAMEF26H0Y7S4 382 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 FOSL2P15408 326 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 LTBRP36941 435 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 KCNJ10P78508 379 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 ZNHIT3Q15649 155 aaPredicted RBP14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 SOWAHCQ53LP3 525 aaPredicted RBP14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 PRR22Q8IZ63 422 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 SVOPQ8N4V2 548 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 OR6T1Q8NGN1 323 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 LINC00615Q96LM1 132 aaPredicted RBP14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 TEX12Q9BXU0 123 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 PCDHGA4Q9Y5G9 962 aa14.98□□□□□ -0.01
SMARCD1-202ENST00000394963 H0YAE9 185 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 KRT20P35900 424 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 FOXL2P58012 376 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 KCNC4Q03721 635 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 GINS1Q14691 196 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 COLEC12Q5KU26 742 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 B3GNT8Q7Z7M8 397 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 SYNPOQ8N3V7 929 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 C8orf33Q9H7E9 229 aaPredicted RBP14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 IGKV1-8A0A0C4DH67 115 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 A0A1W2PPV9 198 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 FHP07954 510 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 AZGP1P25311 298 aaKnown RBP14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 PTPN6P29350 595 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 RPL4P36578 427 aaKnown RBP14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 LARS2Q15031 903 aaKnown RBP14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 PTGES3Q15185 160 aaKnown RBP14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 TIGD6Q17RP2 521 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 SPATS1Q496A3 300 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 UBE2J2Q8N2K1 259 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 OR52P1PQ8NH57 321 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 KIR3DX1Q9H7L2 352 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 ASIC5Q9NY37 505 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 GTF2A1LQ9UNN4 478 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 CUL9Q8IWT3 2517 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 GRXCR2A6NFK2 248 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 TLR4O00206 839 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 PCDHGA12O60330 932 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 CPMP14384 443 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 EMX1Q04741 257 aaPredicted RBP14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 NR1D2Q14995 579 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 DEPDC4Q8N2C3 294 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 CAMKK1Q8N5S9 505 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 GOLM1Q8NBJ4 401 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 PTCHD1Q96NR3 888 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 KCNS3Q9BQ31 491 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 UCK2Q9BZX2 261 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms