RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 UBQLN3Q9H347 655 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 ZFP64Q9NPA5 681 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 PSMC3IPQ9P2W1 217 aaPredicted RBP8.12□□□□□ -1.11
ATG4A-205ENST00000394892 VPS29Q9UBQ0 182 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 CCL27Q9Y4X3 112 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 NPFFR2Q9Y5X5 522 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 F8P00451 2351 aa8.12□□□□□ -1.11
ATG4A-205ENST00000394892 TACC2O95359 2948 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 A0A0G2JNJ9 132 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 C1orf226A1L170 272 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 ANKRD33BA6NCL7 494 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 AQP7O14520 342 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 SUSD5O60279 629 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 PLIN3O60664 434 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 ERAL1O75616 437 aaKnown RBP8.11□□□□□ -1.11
ATG4A-205ENST00000394892 IL3P08700 152 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 NT5EP21589 574 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 ABCD3P28288 659 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 CASP3P42574 277 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 TRPC1P48995 793 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 DLX5P56178 289 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 WNT3P56703 355 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 LCP2Q13094 533 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 SLC10A1Q14973 349 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 RASA2Q15283 850 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 TESK1Q15569 626 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 ZNF628Q5EBL2 1059 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 DCST1Q5T197 706 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 GALNT18Q6P9A2 607 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 POMZP3Q6PJE2 187 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 NPSR1Q6W5P4 371 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 ZYG11AQ6WRX3 759 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 MEX3BQ6ZN04 569 aaKnown RBP8.11□□□□□ -1.11
ATG4A-205ENST00000394892 SLC29A4Q7RTT9 530 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 PAGE2Q7Z2X7 111 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 CCDC116Q8IYX3 515 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 OR7G1Q8NGA0 311 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 OR2W6PQ8NHA6 318 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 METTL6Q8TCB7 284 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 ACMSDQ8TDX5 336 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 EPS8L3Q8TE67 593 aaKnown RBP8.11□□□□□ -1.11
ATG4A-205ENST00000394892 C16orf78Q8WTQ4 265 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 TTYH2Q9BSA4 534 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 ANGPTL4Q9BY76 406 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 TP63Q9H3D4 680 aaPredicted RBP8.11□□□□□ -1.11
ATG4A-205ENST00000394892 ANKZF1Q9H8Y5 726 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 WDR41Q9HAD4 459 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 ACKR4Q9NPB9 350 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 AHSPQ9NZD4 102 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 EHD3Q9NZN3 535 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 CNIH4Q9P003 139 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 Q9UFV3 132 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 MCM8Q9UJA3 840 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 SNX6Q9UNH7 406 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 DLGAP4Q9Y2H0 992 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 PLLPQ9Y342 182 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 PTGDR2Q9Y5Y4 395 aa8.11□□□□□ -1.11
ATG4A-205ENST00000394892 PKDREJQ9NTG1 2253 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 ZNF407Q9C0G0 2248 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 TRGV5A0A0B4J1U4 118 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 SERTM1A2A2V5 107 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 C2orf72A6NCS6 295 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 OR14I1A6ND48 311 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 FAM90A27PA6NNH2 459 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 HCN1O60741 890 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 UGT2B11O75310 529 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 ULK1O75385 1050 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 ESRRBO95718 433 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 GSTA1P08263 222 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 CT45A8P0DMV1 189 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 CT45A9P0DMV2 189 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 HSD3B1P14060 373 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 TAC1P20366 129 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 HSD3B2P26439 372 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 ACVR2AP27037 513 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 ARRB2P32121 409 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 NAGLUP54802 743 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 TRA2BP62995 288 aaKnown RBP8.1□□□□□ -1.11
ATG4A-205ENST00000394892 KCNJ2P63252 427 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 SLC18A2Q05940 514 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 CSTF3Q12996 717 aaKnown RBP8.1□□□□□ -1.11
ATG4A-205ENST00000394892 RPS6KA2Q15349 733 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 CEBPEQ15744 281 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 CT45A2Q5DJT8 189 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 LGSNQ5TDP6 509 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 ZNF585AQ6P3V2 769 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 LCA5Q86VQ0 697 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 TDRPQ86YL5 185 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 VWA5B2Q8N398 1253 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 CCNYL1Q8N7R7 359 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 NAXEQ8NCW5 288 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 C7orf57Q8NEG2 295 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 C17orf47Q8NEP4 570 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 OR52R1Q8NGF1 315 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 OR9A2Q8NGT5 310 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 RNF138Q8WVD3 245 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 DIO2Q92813 273 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 KAT2AQ92830 837 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 KLHL29Q96CT2 875 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 RILPQ96NA2 401 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms