RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 MRGPREQ86SM8 312 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 PDZD3Q86UT5 571 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 REM2Q8IYK8 340 aaPredicted RBP9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 Q8N402 240 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 LILRA3Q8N6C8 439 aaPredicted RBP9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 SLAIN1Q8ND83 568 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 TOR1AIP2Q8NFQ8 470 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 ZFAND1Q8TCF1 268 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 JPH3Q8WXH2 748 aaPredicted RBP9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 SMG7Q92540 1137 aaKnown RBP9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 TTC9Q92623 222 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 RNF170Q96K19 258 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 KATNB1Q9BVA0 655 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 SLC46A2Q9BY10 475 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 OR2AG1Q9H205 316 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 KCNN2Q9H2S1 579 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 ASB6Q9NWX5 421 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 MARK1Q9P0L2 795 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 ASF1AQ9Y294 204 aa9.5□□□□□ -0.89
UBE2D3-208ENST00000394803 KDM4EB2RXH2 506 aaPredicted RBP9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 FAM227AF5H4B4 570 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 SGK494L7N484 410 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 TNFRSF10AO00220 468 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 PLD2O14939 933 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 LILRB5O75023 590 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 SLC43A1O75387 559 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 TP53P04637 393 aaPredicted RBP9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 INHAP05111 366 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 ADH1AP07327 375 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 C8AP07357 584 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 MSL3P1P0C860 447 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 MMP11P24347 488 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 ACADLP28330 430 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 BSGP35613 385 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 REEP5Q00765 189 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 DPTQ07507 201 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 TSPAN31Q12999 210 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 MRPL28Q13084 256 aaKnown RBP9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 TRAM2Q15035 370 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 IER5LQ5T953 404 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 HACD4Q5VWC8 232 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 TYW3Q6IPR3 259 aaKnown RBP9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 RTL10Q7L3V2 364 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 GET4Q7L5D6 327 aaPredicted RBP9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 IQCHQ86VS3 1027 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 KLHL36Q8N4N3 616 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 OSTF1Q92882 214 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 FOXJ1Q92949 421 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 TRMT61AQ96FX7 289 aaKnown RBP9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 HHIPL1Q96JK4 782 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 GDF15Q99988 308 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 ARHGAP9Q9BRR9 750 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 TTYH2Q9BSA4 534 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 TMEM121BQ9BXQ6 578 aaPredicted RBP9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 MMP28Q9H239 520 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 OR51I1Q9H343 314 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 TRPC4Q9UBN4 977 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 NUFIP1Q9UHK0 495 aaKnown RBP9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 CLCA2Q9UQC9 943 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 SH2B3Q9UQQ2 575 aa9.49□□□□□ -0.89
UBE2D3-208ENST00000394803 LINC00854A0A1B0GVQ3 168 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 FAM240BA0A1B0GVZ2 78 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 NOTOA8MTQ0 251 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 NDUFS4O43181 175 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 TGM5O43548 720 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 EFCAB14O75071 495 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 POP7O75817 140 aaKnown RBP9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 UBXN7O94888 489 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 EPHX1P07099 455 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 ERGP11308 486 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 CA8P35219 290 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 ARFIP1P53367 373 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 EFNB1P98172 346 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 CAP1Q01518 475 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 MEF2AQ02078 507 aaPredicted RBP9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 BDH1Q02338 343 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 FAPQ12884 760 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 ADAM15Q13444 863 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 TNK1Q13470 666 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 TMEM35AQ53FP2 167 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 RAET1GQ6H3X3 334 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.48□□□□□ -0.892e-6■■■■□ 20.8
UBE2D3-208ENST00000394803 RASSF6Q6ZTQ3 369 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 VASH1Q7L8A9 365 aaPredicted RBP9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 ANKK1Q8NFD2 765 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 OR56A1Q8NGH5 318 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 OR52N1Q8NH53 320 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 CXorf40AQ8TE69 158 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 RAB8BQ92930 207 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 EXOSC8Q96B26 276 aaKnown RBP9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 SCLYQ96I15 445 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 MRGPRX3Q96LB0 322 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 GTPBP2Q9BX10 602 aaKnown RBP9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 JAM3Q9BX67 310 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 CACYBPQ9HB71 228 aaKnown RBP9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 RANGRFQ9HD47 186 aaPredicted RBP9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 SIRT3Q9NTG7 399 aaPredicted RBP9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 ACOXLQ9NUZ1 547 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 KLHL28Q9NXS3 571 aa9.48□□□□□ -0.89
UBE2D3-208ENST00000394803 FBXW2Q9UKT8 454 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms