RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 RERGLQ9H628 205 aa17.33■□□□□ 0.36
PCDHA1-202ENST00000394633 SPIN1Q9Y657 262 aaPredicted RBP17.33■□□□□ 0.36
PCDHA1-202ENST00000394633 FABP12A6NFH5 140 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 KPNA3O00505 521 aaPredicted RBP17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 LRRTM2O43300 516 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 FHP07954 510 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 DDX6P26196 483 aaKnown RBP eCLIP17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 BNC1Q01954 994 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 ZNF77Q15935 545 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 SLC25A30Q5SVS4 291 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 OLIG3Q7RTU3 272 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 OR5AR1Q8NGP9 310 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 HCAR2Q8TDS4 363 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 RASSF5Q8WWW0 418 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 UCN3Q969E3 161 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 LRIG1Q96JA1 1093 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 RHBGQ9H310 441 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 LHX9Q9NQ69 397 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 COL4A3Q01955 1670 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 A0A1W2PRQ8 180 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 SMIM30A4D0T7 59 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 PAPLNO95428 1278 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 OR12D1P0DN82 309 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 SDC2P34741 201 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 CCT3P49368 545 aaKnown RBP17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 RPS25P62851 125 aaKnown RBP17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 OR2G6Q5TZ20 316 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 RAET1GQ6H3X3 334 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 VASH1Q7L8A9 365 aaPredicted RBP17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 RDH10Q8IZV5 341 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 TBC1D19Q8N5T2 526 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 ZNF557Q8N988 423 aaPredicted RBP17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 OR5D16Q8NGK9 328 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 SLC7A6Q92536 515 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 RSPRY1Q96DX4 576 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 DIRAS2Q96HU8 199 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 RNF170Q96K19 258 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 DEPDC7Q96QD5 511 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 TTYH2Q9BSA4 534 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 DPEP2Q9H4A9 486 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 PLSCR3Q9NRY6 295 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 MAN2C1Q9NTJ4 1040 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 DPP7Q9UHL4 492 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 ASF1AQ9Y294 204 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 PCYT1BQ9Y5K3 369 aaPredicted RBP17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 WNT6Q9Y6F9 365 aa17.32■□□□□ 0.36
PCDHA1-202ENST00000394633 SEC14L5O43304 696 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 SCO2O43819 266 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 APOL3O95236 402 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 EPHX1P07099 455 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 GPR1P46091 355 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 GIPRP48546 466 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 SLC9A3P48764 834 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 EFNB1P98172 346 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 CDK5Q00535 292 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 CD300LDQ6UXZ3 194 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 NATD1Q8N6N6 113 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 OR4K5Q8NGD3 323 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 TM9SF4Q92544 642 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 MRPL38Q96DV4 380 aaKnown RBP17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 NUS1Q96E22 293 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 LINC00615Q96LM1 132 aaPredicted RBP17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 LMAN2LQ9H0V9 348 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 WDR70Q9NW82 654 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 CUEDC1Q9NWM3 386 aaPredicted RBP17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 ZSCAN32Q9NX65 697 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 NUFIP1Q9UHK0 495 aaKnown RBP17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 FBXW2Q9UKT8 454 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 SF3B6Q9Y3B4 125 aaKnown RBP17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 DOCK8Q8NF50 2099 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 A0A0B4J293 547 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 C17orf113A0A1B0GUU1 675 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 CCDC182A6NF36 153 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 B4DXG7 233 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 TMPRSS11DO60235 418 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 TMCC2O75069 709 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 EPPINO95925 133 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 TSPAN19P0C672 248 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 WNT4P56705 351 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 COX10Q12887 443 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 MADCAM1Q13477 382 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 UAP1L1Q3KQV9 507 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 SLC35F1Q5T1Q4 408 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 PDZK1Q5T2W1 519 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 HSDL2Q6YN16 418 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 IQCHQ86VS3 1027 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 VWA5B2Q8N398 1253 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 GDPD1Q8N9F7 314 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 SYT14Q8NB59 555 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 OR2L2Q8NH16 312 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 RAD51AP1Q96B01 352 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 RNF31Q96EP0 1072 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 FNDC11Q9BVV2 318 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 OR52A5Q9H2C5 316 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 TMEM245Q9H330 911 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 OR51I1Q9H343 314 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 SFXN1Q9H9B4 322 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 TEX10Q9NXF1 929 aaPredicted RBP17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 P2RX2Q9UBL9 471 aa17.31■□□□□ 0.36
PCDHA1-202ENST00000394633 TAC3Q9UHF0 121 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms