RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 PCDHB11Q9Y5F2 797 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 OR51B4Q9Y5P0 310 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 A0A096LPI6 279 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 A0A1W2PPL8 197 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 TTLL8A6PVC2 850 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 POM121CA8CG34 1229 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 GFRA2O00451 464 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 CCNB2O95067 398 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 OR5F1O95221 314 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 RLN1P04808 185 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 HMGN1P05114 100 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 C1GALT1C1LP0DN25 315 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 C21orf33P30042 268 aaPredicted RBP5.41□□□□□ -1.54
RFFL-202ENST00000394597 GGT5P36269 586 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 CDH12P55289 794 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 RRAS2P62070 204 aaPredicted RBP5.41□□□□□ -1.54
RFFL-202ENST00000394597 GRIK2Q13002 908 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 FADDQ13158 208 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 IDNKQ5T6J7 187 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 KANK2Q63ZY3 851 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 BLOC1S3Q6QNY0 202 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 TBPL2Q6SJ96 375 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 TMIGD1Q6UXZ0 262 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 C17orf107Q6ZR85 190 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 RFLNAQ6ZTI6 216 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 SSX6Q7RTT6 188 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 SLITRK4Q8IW52 837 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 GHDCQ8N2G8 530 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 TOMM5Q8N4H5 51 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 LINC00469Q8N7U9 141 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 KIAA1958Q8N8K9 716 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 TMEM145Q8NBT3 493 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 OR52B6Q8NGF0 335 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 USP7Q93009 1102 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 FBXW5Q969U6 566 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 TMEM125Q96AQ2 219 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 PYURFQ96I23 114 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 CCDC115Q96NT0 180 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 LYSMD1Q96S90 227 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 UHRF1Q96T88 793 aaPredicted RBP5.41□□□□□ -1.54
RFFL-202ENST00000394597 PELOQ9BRX2 385 aaKnown RBP5.41□□□□□ -1.54
RFFL-202ENST00000394597 DUSP26Q9BV47 211 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 ZNF436Q9C0F3 470 aaPredicted RBP5.41□□□□□ -1.54
RFFL-202ENST00000394597 PIGUQ9H490 435 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 NIT2Q9NQR4 276 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 PRDM8Q9NQV8 689 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 SLC2A4RGQ9NR83 387 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 STOX2Q9P2F5 926 aaPredicted RBP5.41□□□□□ -1.54
RFFL-202ENST00000394597 TBC1D24Q9ULP9 559 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 PLAGL1Q9UM63 463 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 GPR34Q9UPC5 381 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 YARS2Q9Y2Z4 477 aaKnown RBP5.41□□□□□ -1.54
RFFL-202ENST00000394597 PTGDR2Q9Y5Y4 395 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 HSPE1-MOB4S4R3N1 261 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 LOC102723532A0A0G2JNH3 316 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 PDCD5O14737 125 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 ADAMDEC1O15204 470 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 FZD6O60353 706 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 MPZL2O60487 215 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 KHDRBS3O75525 346 aaKnown RBP5.41□□□□□ -1.54
RFFL-202ENST00000394597 TGM6O95932 706 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 RPS17P08708 135 aaKnown RBP5.41□□□□□ -1.54
RFFL-202ENST00000394597 SLC35G6P0C7Q6 338 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 GLULP15104 373 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 CD9P21926 228 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 PAICSP22234 425 aaKnown RBP5.41□□□□□ -1.54
RFFL-202ENST00000394597 CPN2P22792 545 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 LHCGRP22888 699 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 ACADLP28330 430 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 CSTF2P33240 577 aaKnown RBP eCLIP5.41□□□□□ -1.54
RFFL-202ENST00000394597 RYKP34925 604 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 RFX3P48380 749 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 ERVPABLB-1P60509 514 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 DEFA6Q01524 100 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 NPRL3Q12980 569 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 C18orf21Q32NC0 220 aaPredicted RBP5.41□□□□□ -1.54
RFFL-202ENST00000394597 SYT6Q5T7P8 510 aaPredicted RBP5.41□□□□□ -1.54
RFFL-202ENST00000394597 ZNF691Q5VV52 312 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 FAM109BQ6ICB4 259 aaPredicted RBP5.41□□□□□ -1.54
RFFL-202ENST00000394597 UNC5DQ6UXZ4 953 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 ZNF367Q7RTV3 350 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 B3GNT8Q7Z7M8 397 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 RETREG3Q86VR2 466 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 CYP4Z2PQ8N1L4 340 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 TMEM151AQ8N4L1 468 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 DTWD1Q8N5C7 304 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 C1orf52Q8N6N3 182 aaKnown RBP5.41□□□□□ -1.54
RFFL-202ENST00000394597 FAM46DQ8NEK8 389 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 ZNF680Q8NEM1 530 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 ATP6V1C2Q8NEY4 427 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 OR7G3Q8NG95 312 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 RPLP0P6Q8NHW5 317 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 TNFAIP8L1Q8WVP5 186 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 RGMAQ96B86 450 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 MCCC1Q96RQ3 725 aaPredicted RBP5.41□□□□□ -1.54
RFFL-202ENST00000394597 MYADMQ96S97 322 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 SLC38A3Q99624 504 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 SORBS1Q9BX66 1292 aaKnown RBP5.41□□□□□ -1.54
RFFL-202ENST00000394597 HDAC8Q9BY41 377 aa5.41□□□□□ -1.54
RFFL-202ENST00000394597 ENAMQ9NRM1 1142 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms