RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 CAMK1Q14012 370 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 MEDAGQ5VYS4 303 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 BICRALQ6AI39 1079 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 NUDT18Q6ZVK8 323 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 ANKK1Q8NFD2 765 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 OR52P1PQ8NH57 321 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 SLC35B4Q969S0 331 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 MYNNQ9NPC7 610 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 TEX10Q9NXF1 929 aaPredicted RBP15.28■□□□□ 0.04
PCDH1-203ENST00000394536 ARID1AO14497 2285 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 FAM86C2PA6NEL3 165 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 OR2B3O76000 313 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 DDCP20711 480 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 GSTM3P21266 225 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 BTN3A2P78410 334 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 ST3GAL3Q11203 375 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 CXXC5Q7LFL8 322 aaKnown RBP15.28■□□□□ 0.04
PCDH1-203ENST00000394536 PROKR2Q8NFJ6 384 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 PLSCR3Q9NRY6 295 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 PLCXD1Q9NUJ7 323 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 TXNL4BQ9NX01 149 aaKnown RBP15.28■□□□□ 0.04
PCDH1-203ENST00000394536 SH2B3Q9UQQ2 575 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 OR1A2Q9Y585 309 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 PCM1Q15154 2024 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 PRKYO43930 277 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 REM1O75628 298 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 SCG5P05408 212 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 ADH5P11766 374 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 PRLHRP49683 370 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 RPS25P62851 125 aaKnown RBP15.28■□□□□ 0.04
PCDH1-203ENST00000394536 ZNF33BQ06732 778 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 SDE2Q6IQ49 451 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 IZUMO1Q8IYV9 350 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 VWA5B2Q8N398 1253 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 OR56A3Q8NH54 315 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 LILRB4Q8NHJ6 448 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 SUN5Q8TC36 379 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 CLIP3Q96DZ5 547 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 CHIAQ9BZP6 476 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 C11orf54Q9H0W9 315 aaPredicted RBP15.28■□□□□ 0.04
PCDH1-203ENST00000394536 RC3H2Q9HBD1 1191 aaKnown RBP15.28■□□□□ 0.04
PCDH1-203ENST00000394536 SBF1O95248 1867 aa15.28■□□□□ 0.04
PCDH1-203ENST00000394536 TBC1D3DA0A087WVF3 549 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 TBC1D3IA0A087WXS9 549 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 TBC1D3EA0A087X179 549 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 TBC1D3KA0A087X1G2 549 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 TBC1D3FA6NER0 549 aaPredicted RBP15.27■□□□□ 0.04
PCDH1-203ENST00000394536 LRRC72A6NJI9 287 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 TBC1D3LB9A6J9 549 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 H3BSH0 61 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 TBC1D3HP0C7X1 549 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 TBC1D3GQ6DHY5 549 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 TBC1D3CQ6IPX1 549 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 UNC5DQ6UXZ4 953 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 NOXA1Q86UR1 476 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 PEX5LQ8IYB4 626 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 TBC1D3Q8IZP1 549 aaPredicted RBP15.27■□□□□ 0.04
PCDH1-203ENST00000394536 OR51A7Q8NH64 312 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 HOXD1Q9GZZ0 328 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 RPS6KB2Q9UBS0 482 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 ZNF860A6NHJ4 632 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 FCER2P06734 321 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 GNSP15586 552 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 ZNF24P17028 368 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 NT5EP21589 574 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 ELAVL4P26378 380 aaKnown RBP15.27■□□□□ 0.04
PCDH1-203ENST00000394536 TLX1P31314 330 aaPredicted RBP15.27■□□□□ 0.04
PCDH1-203ENST00000394536 ACVR1BP36896 505 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 ARPC4P59998 168 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 ZNF750Q32MQ0 723 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 RNF44Q7L0R7 432 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 CPXM2Q8N436 756 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 FAM98AQ8NCA5 519 aaKnown RBP15.27■□□□□ 0.04
PCDH1-203ENST00000394536 OR14C36Q8NHC7 312 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 GRHL3Q8TE85 626 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 ZNF354BQ96LW1 612 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 NRTNQ99748 197 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 SAP130Q9H0E3 1048 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 ABCG5Q9H222 651 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 ENAMQ9NRM1 1142 aa15.27■□□□□ 0.04
PCDH1-203ENST00000394536 PLXNA1Q9UIW2 1896 aa15.27■□□□□ 0.03
PCDH1-203ENST00000394536 TOXO94900 526 aa15.27■□□□□ 0.03
PCDH1-203ENST00000394536 TATDN3Q17R31 274 aa15.27■□□□□ 0.03
PCDH1-203ENST00000394536 ASTLQ6HA08 431 aaPredicted RBP15.27■□□□□ 0.03
PCDH1-203ENST00000394536 TCTN3Q6NUS6 607 aa15.27■□□□□ 0.03
PCDH1-203ENST00000394536 MTFR2Q6P444 385 aa15.27■□□□□ 0.03
PCDH1-203ENST00000394536 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.27■□□□□ 0.03
PCDH1-203ENST00000394536 AMIGO1Q86WK6 493 aa15.27■□□□□ 0.03
PCDH1-203ENST00000394536 NRMQ8IXM6 262 aa15.27■□□□□ 0.03
PCDH1-203ENST00000394536 SLC35C2Q9NQQ7 365 aa15.27■□□□□ 0.03
PCDH1-203ENST00000394536 MRPL39Q9NYK5 338 aaKnown RBP15.27■□□□□ 0.03
PCDH1-203ENST00000394536 TAAR2Q9P1P5 351 aa15.27■□□□□ 0.03
PCDH1-203ENST00000394536 NAALAD2Q9Y3Q0 740 aa15.27■□□□□ 0.03
PCDH1-203ENST00000394536 SPACA6W5XKT8 324 aa15.27■□□□□ 0.03
PCDH1-203ENST00000394536 SEC16AO15027 2179 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 EEF1E1O43324 174 aaKnown RBP15.26■□□□□ 0.03
PCDH1-203ENST00000394536 GCGRP47871 477 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 GNG2P59768 71 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 RAE1P78406 368 aaKnown RBP15.26■□□□□ 0.03
PCDH1-203ENST00000394536 MAB21L1Q13394 359 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms