RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 SUV39H1O43463 412 aa11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 GALR2O43603 387 aaPredicted RBP11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 SLC28A2O43868 658 aa11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 CST1P01037 141 aa11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 FCGR1AP12314 374 aa11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 ZNF26P17031 533 aaPredicted RBP11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 MAOAP21397 527 aa11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 PPP2R1BP30154 601 aa11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 SKP1P63208 163 aa11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 VLDLRP98155 873 aa11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 SQSTM1Q13501 440 aa11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 EXOSC7Q15024 291 aaKnown RBP11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 SF3A2Q15428 464 aaKnown RBP11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 FAM214AQ32MH5 1076 aa11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 ZNF628Q5EBL2 1059 aa11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 REEP3Q6NUK4 255 aa11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 KMT5CQ86Y97 462 aa11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 SAMD14Q8IZD0 417 aaPredicted RBP11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 ST13P4Q8IZP2 240 aaPredicted RBP11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 ANKFN1Q8N957 763 aa11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 OR4D9Q8NGE8 314 aa11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 RSPO3Q9BXY4 272 aaPredicted RBP11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 A4GALTQ9NPC4 353 aa11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 PRDM9Q9NQV7 894 aa11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 SERTAD3Q9UJW9 196 aa11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 ABCG2Q9UNQ0 655 aa11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 ANGPT4Q9Y264 503 aa11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 MAGED1Q9Y5V3 778 aaPredicted RBP11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 EP300Q09472 2414 aaPredicted RBP11.42□□□□□ -0.58
SPTBN1-203ENST00000389980 C7orf72A4D263 438 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 ATP1B1P05026 303 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 KHKP50053 298 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 PCBP3P57721 371 aaKnown RBP11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 FUT5Q11128 374 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 PLA2G2CQ5R387 149 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 PHF19Q5T6S3 580 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 BHLHB9Q6PI77 547 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 ZBTB49Q6ZSB9 765 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 ZDHHC21Q8IVQ6 265 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 CBR4Q8N4T8 237 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 CATSPER1Q8NEC5 780 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 BTBD9Q96Q07 612 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 OR7D2Q96RA2 312 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 OR6C1Q96RD1 312 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 NDC1Q9BTX1 674 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 RUBCNLQ9H714 662 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 ADAP2Q9NPF8 381 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 PRTFDC1Q9NRG1 225 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 RXFP3Q9NSD7 469 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 BLOC1S6Q9UL45 172 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 H0YIG0 161 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 TOX3O15405 576 aaPredicted RBP11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 GDF9O60383 454 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 PGM3O95394 542 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 SEMG1P04279 462 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 NR2F1P10589 423 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 GCGRP47871 477 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 OR1E2P47887 323 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 MAN2A2P49641 1150 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 SELENOWP63302 87 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 KCNJ10P78508 379 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 MGAT2Q10469 447 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 STX4Q12846 297 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 PRICKLE4Q2TBC4 344 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 INTS11Q5TA45 600 aaKnown RBP11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 FHL5Q5TD97 284 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 TBPL2Q6SJ96 375 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 CCDC80Q76M96 950 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 B3GNT8Q7Z7M8 397 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 OR2L13Q8N349 312 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 SLC16A11Q8NCK7 471 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 TMBIM1Q969X1 311 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 MOAP1Q96BY2 351 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 LOXL4Q96JB6 756 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 CNDP2Q96KP4 475 aaKnown RBP11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 GFM1Q96RP9 751 aaKnown RBP11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 DPYSL5Q9BPU6 564 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 ALOXE3Q9BYJ1 711 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 MAGIXQ9H6Y5 334 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 ADPRHL2Q9NX46 363 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 GALNT8Q9NY28 637 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 MAT2BQ9NZL9 334 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 PCDHGA5Q9Y5G8 931 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 CLDN16Q9Y5I7 305 aa11.41□□□□□ -0.58
SPTBN1-203ENST00000389980 HRKO00198 91 aa11.4□□□□□ -0.58
SPTBN1-203ENST00000389980 PLOD2O00469 737 aa11.4□□□□□ -0.58
SPTBN1-203ENST00000389980 ACOX3O15254 700 aa11.4□□□□□ -0.58
SPTBN1-203ENST00000389980 OR10H2O60403 315 aa11.4□□□□□ -0.58
SPTBN1-203ENST00000389980 DEAF1O75398 565 aaPredicted RBP11.4□□□□□ -0.58
SPTBN1-203ENST00000389980 TIAF1O95411 115 aa11.4□□□□□ -0.58
SPTBN1-203ENST00000389980 ZNF23P17027 643 aa11.4□□□□□ -0.58
SPTBN1-203ENST00000389980 DUSP7Q16829 419 aa11.4□□□□□ -0.58
SPTBN1-203ENST00000389980 CRB2Q5IJ48 1285 aa11.4□□□□□ -0.58
SPTBN1-203ENST00000389980 NIPAL1Q6NVV3 410 aa11.4□□□□□ -0.58
SPTBN1-203ENST00000389980 UGT2A3Q6UWM9 527 aa11.4□□□□□ -0.58
SPTBN1-203ENST00000389980 PRSS58Q8IYP2 241 aa11.4□□□□□ -0.58
SPTBN1-203ENST00000389980 HS3ST5Q8IZT8 346 aa11.4□□□□□ -0.58
SPTBN1-203ENST00000389980 SPPL2AQ8TCT8 520 aa11.4□□□□□ -0.58
SPTBN1-203ENST00000389980 RHBDD1Q8TEB9 315 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms