RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 RBPMSQ93062 196 aaKnown RBP0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 TATDN2Q93075 761 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 SMARCD1Q96GM5 515 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 IFT74Q96LB3 600 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 SGCZQ96LD1 299 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 DUX3Q96PT4 197 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 KCNS3Q9BQ31 491 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 ATG101Q9BSB4 218 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 PCGF1Q9BSM1 259 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 C2orf49Q9BVC5 232 aaPredicted RBP0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 BTBD2Q9BX70 525 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 UGT2B28Q9BY64 529 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 MRPL4Q9BYD3 311 aaKnown RBP0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 POTEKPQ9BYX7 375 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 NDEL1Q9GZM8 345 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 PUS7LQ9H0K6 701 aaKnown RBP0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 MUC3BQ9H195 1237 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 TPK1Q9H3S4 243 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 UNC45AQ9H3U1 944 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 RIOX1Q9H6W3 641 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 NANOGQ9H9S0 305 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 NMUR1Q9HB89 426 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 FOLH1BQ9HBA9 442 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 C6orf50Q9HD87 102 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 DMAP1Q9NPF5 467 aaPredicted RBP0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 SEMA4BQ9NPR2 832 aaPredicted RBP0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 C14orf105Q9NVL8 296 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 IFT57Q9NWB7 429 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 SAMD15Q9P1V8 674 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 FBXW2Q9UKT8 454 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 BRPF3Q9ULD4 1205 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 VSIG4Q9Y279 399 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 DDX52Q9Y2R4 599 aaKnown RBP eCLIP0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 REXO2Q9Y3B8 237 aaKnown RBP0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 TANC2Q9HCD6 1990 aa0.74□□□□□ -2.29
RNU6-42P-201ENST00000384165 SNRNP200O75643 2136 aaKnown RBP0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 TRAV10A0A0B4J240 114 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 IGHV1-69DA0A0B4J2H0 117 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 GOLGA8QA0A0J9YX86 632 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 CENPVL1A0A0U1RR11 272 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 CENPVL3A0A0U1RRI6 287 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 GOLGA8OA6NCC3 632 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 A6NLC8 198 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 GOLGA8NF8WBI6 632 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 H0YC42 278 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 H3BUI4 141 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 GOLGA8RI6L899 631 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 hCG_2039718K7EN88 272 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 P2RY10O00398 339 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 ZNF195O14628 629 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 APAF1O14727 1248 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 SMAD6O43541 496 aaKnown RBP0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 HCRTO43612 131 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 PLOD3O60568 738 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 CDC14BO60729 498 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 ASS1P00966 412 aaKnown RBP0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 IGHV1-69P01742 117 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 INHBAP08476 426 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 SNRNP70P08621 437 aaKnown RBP0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 ANXA5P08758 320 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 SBK2P0C263 348 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 SLC35E2BP0CK96 405 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 TPBGLP0DKB5 382 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 ZNF7P17097 686 aaPredicted RBP0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 ERCC2P18074 760 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 EPORP19235 508 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 TCN1P20061 433 aaPredicted RBP0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 FUT3P21217 361 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 HRH2P25021 359 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 RPL10P27635 214 aaKnown RBP0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 GJB2P29033 226 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 EPHA3P29320 983 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 GNA11P29992 359 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 PRKAR1BP31321 381 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 GKP32189 559 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 PIGAP37287 484 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 SLC9A3P48764 834 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 GNAQP50148 359 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 NEK4P51957 841 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 PGGT1BP53609 377 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 NAGLUP54802 743 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 WNT3AP56704 352 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 SLC37A1P57057 533 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 EEFSECP57772 596 aaKnown RBP0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 POLR2FP61218 127 aaKnown RBP0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 FGF12P61328 243 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 TUBA4AP68366 448 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 ACSM2AQ08AH3 577 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 TBL3Q12788 808 aaKnown RBP0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 SLAMF1Q13291 335 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 NAA25Q14CX7 972 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 EFNB3Q15768 340 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 LONRF2Q1L5Z9 754 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 DEFB110Q30KQ9 67 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 ESCO2Q56NI9 601 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 AARS2Q5JTZ9 985 aaKnown RBP0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 TIMM23BQ5SRD1 257 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 PPP1R15BQ5SWA1 713 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 XP32Q5T750 250 aa0.73□□□□□ -2.29
RNU6-42P-201ENST00000384165 C20orf194Q5TEA3 1177 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms