RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 CTHRC1Q96CG8 243 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 DHRS1Q96LJ7 313 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 MUS81Q96NY9 551 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 PELOQ9BRX2 385 aaKnown RBP12.73□□□□□ -0.37
SEC13-203ENST00000383801 TMEM121BQ9BXQ6 578 aaPredicted RBP12.73□□□□□ -0.37
SEC13-203ENST00000383801 GRIP2Q9C0E4 1043 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 ING2Q9H160 280 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 PIGUQ9H490 435 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 MTHFD2LQ9H903 347 aaPredicted RBP12.73□□□□□ -0.37
SEC13-203ENST00000383801 PRDM6Q9NQX0 595 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 POLE3Q9NRF9 147 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 DUSP22Q9NRW4 184 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 KRT84Q9NSB2 600 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 KIF17Q9P2E2 1029 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 ACAD8Q9UKU7 415 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 CLCA2Q9UQC9 943 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 HCN4Q9Y3Q4 1203 aa12.73□□□□□ -0.37
SEC13-203ENST00000383801 IGHV1OR21-1A0A087WYE8 117 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 A0A1B0GVT2 93 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 PRAMEF27A3QJZ7 478 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 E9PQ18 207 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 LAMTOR5O43504 91 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 CHST10O43529 356 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 COQ9O75208 318 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 GADD45GO95257 159 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 LGI1O95970 557 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 TFAP2AP05549 437 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 PRKACGP22612 351 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 TTKP33981 857 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 HSD11B2P80365 405 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 IGLV3-21P80748 117 aaPredicted RBP12.72□□□□□ -0.37
SEC13-203ENST00000383801 SIM1P81133 766 aaPredicted RBP12.72□□□□□ -0.37
SEC13-203ENST00000383801 PUM1Q14671 1186 aaKnown RBP eCLIP12.72□□□□□ -0.37
SEC13-203ENST00000383801 PRICKLE4Q2TBC4 344 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 ZNF750Q32MQ0 723 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 ZIK1Q3SY52 487 aaPredicted RBP12.72□□□□□ -0.37
SEC13-203ENST00000383801 FHL5Q5TD97 284 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 PEAR1Q5VY43 1037 aaPredicted RBP12.72□□□□□ -0.37
SEC13-203ENST00000383801 CWF19L1Q69YN2 538 aaKnown RBP12.72□□□□□ -0.37
SEC13-203ENST00000383801 SLC25A45Q8N413 288 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 ATG16L2Q8NAA4 619 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 CHDHQ8NE62 594 aaPredicted RBP12.72□□□□□ -0.37
SEC13-203ENST00000383801 FBLIM1Q8WUP2 373 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 NCSTNQ92542 709 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 FBXL20Q96IG2 436 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 COL21A1Q96P44 957 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 MBOAT4Q96T53 435 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 CSF3RQ99062 836 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 DPYSL5Q9BPU6 564 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 APOL4Q9BPW4 351 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 GABARAPL3Q9BY60 117 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 ZNF556Q9HAH1 456 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 CACYBPQ9HB71 228 aaKnown RBP12.72□□□□□ -0.37
SEC13-203ENST00000383801 ACER3Q9NUN7 267 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 UCKL1Q9NWZ5 548 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 POFUT2Q9Y2G5 429 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 MRPS2Q9Y399 296 aaKnown RBP12.72□□□□□ -0.37
SEC13-203ENST00000383801 PCDHGB5Q9Y5G0 923 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 RNF215Q9Y6U7 377 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 ABCA7Q8IZY2 2146 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 EYSQ5T1H1 3165 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 MN1Q10571 1320 aaPredicted RBP12.72□□□□□ -0.37
SEC13-203ENST00000383801 THADAQ6YHU6 1953 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 FOXS1O43638 330 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 MRPS14O60783 128 aaKnown RBP12.72□□□□□ -0.37
SEC13-203ENST00000383801 DIRAS1O95057 198 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 CCDC159P0C7I6 412 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 GIMD1P0DJR0 217 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 PRKAR1BP31321 381 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 IFNA8P32881 189 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 OR1E2P47887 323 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 FNTBP49356 437 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 HLCSP50747 726 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 TPD52P55327 224 aaPredicted RBP12.72□□□□□ -0.37
SEC13-203ENST00000383801 HSD17B7P56937 341 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 GABARAPL2P60520 117 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 ISL1P61371 349 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 HPCAP84074 193 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 SPIBQ01892 262 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 GPAT3Q53EU6 434 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 DHRS4L2Q6PKH6 230 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 C16orf62Q7Z3J2 963 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 PRSS42Q7Z5A4 293 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 SLC44A2Q8IWA5 706 aaPredicted RBP12.72□□□□□ -0.37
SEC13-203ENST00000383801 HS3ST5Q8IZT8 346 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 ZNF786Q8N393 782 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 PARP8Q8N3A8 854 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 SMYD1Q8NB12 490 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 OR7G2Q8NG99 324 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 GPR32P1Q8NGA4 272 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 OR5D16Q8NGK9 328 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 PHF10Q8WUB8 498 aaKnown RBP12.72□□□□□ -0.37
SEC13-203ENST00000383801 HOXB13Q92826 284 aaPredicted RBP12.72□□□□□ -0.37
SEC13-203ENST00000383801 EDAQ92838 391 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 ZNF566Q969W8 418 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 COL26A1Q96A83 441 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 MAGED4Q96JG8 741 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 ZC3H10Q96K80 434 aaKnown RBP12.72□□□□□ -0.37
SEC13-203ENST00000383801 TGM7Q96PF1 710 aa12.72□□□□□ -0.37
SEC13-203ENST00000383801 KLHL28Q9NXS3 571 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms