RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 WASH6PQ9NQA3 447 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 NDUFB11Q9NX14 153 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 ZNF670-ZNF695F2Z2N8 137 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 MEIS2O14770 477 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 MATN3O15232 486 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 FLRT2O43155 660 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 PCCBP05166 539 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 TPOP07202 933 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 TYRP1P17643 537 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 WNT4P56705 351 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 MBTD1Q05BQ5 628 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 LASP1Q14847 261 aaKnown RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 KCNIP4Q6PIL6 250 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 C5orf46Q6UWT4 87 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 FAM83HQ6ZRV2 1179 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 DET1Q7L5Y6 550 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 PXKQ7Z7A4 578 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 TMEM135Q86UB9 458 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 ARMC10Q8N2F6 343 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 BIRC7Q96CA5 298 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 FUBP3Q96I24 572 aaKnown RBP eCLIP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 C5orf34Q96MH7 638 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 RAD9AQ99638 391 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 PITX2Q99697 317 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 SHARPINQ9H0F6 387 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 CDT1Q9H211 546 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 RGCCQ9H4X1 137 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 NUP205Q92621 2012 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 CACNA1AO00555 2505 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 FAM86B1E9PN63 330 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 CLDN4O14493 209 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 NUDT21O43809 227 aaKnown RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 OR10H3O60404 316 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 SLITRK3O94933 977 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 PRH1P02810 166 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 RLN1P04808 185 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 H1F0P07305 194 aaKnown RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 FAM86B2P0C5J1 330 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 RPS2P15880 293 aaKnown RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 TPH1P17752 444 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 ICAM3P32942 547 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 AVPR1BP47901 424 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 TCTE1Q5JU00 501 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 ZNF776Q68DI1 518 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 C17orf64Q86WR6 236 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 KDM8Q8N371 416 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 GPR152Q8TDT2 470 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 WASF3Q9UPY6 502 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 SOWAHBA6NEL2 793 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 ZNF780AO75290 641 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 IFNA2P01563 188 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 ALPLP05186 524 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 MC2RQ01718 297 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 DBPQ10586 325 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 MANEALQ5VSG8 457 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 LIPJQ5W064 366 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 FAM129CQ86XR2 697 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 C15orf54Q8N8G6 183 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 OR10G2Q8NGC3 310 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 OR6S1Q8NH40 331 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 GGHQ92820 318 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 TMEM68Q96MH6 324 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 COPS8Q99627 209 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 HDHD5Q9BXW7 423 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 RBM38Q9H0Z9 239 aaKnown RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 OR52A5Q9H2C5 316 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 SPNS1Q9H2V7 528 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 ADAMTS6Q9UKP5 1117 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 MRPL42Q9Y6G3 142 aaKnown RBP4.67□□□□□ -1.66
PTPRD-203ENST00000381196 THSD7AQ9UPZ6 1657 aa4.67□□□□□ -1.66
PTPRD-203ENST00000381196 SDC3O75056 442 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 EOMESO95936 686 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 MT-CO2P00403 227 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 FHP07954 510 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 COL6A1P12109 1028 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 SRCP12931 536 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 CD247P20963 164 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 CCKBRP32239 447 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 CD86P42081 329 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 RPA4Q13156 261 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 PCBP2Q15366 365 aaKnown RBP eCLIP4.66□□□□□ -1.66
PTPRD-203ENST00000381196 GRIK5Q16478 980 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 CRY2Q49AN0 593 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 TBPL2Q6SJ96 375 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 LBX2Q6XYB7 198 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 ABHD13Q7L211 337 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 PDZD3Q86UT5 571 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 SLC34A3Q8N130 599 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 CELF5Q8N6W0 485 aaKnown RBP4.66□□□□□ -1.66
PTPRD-203ENST00000381196 RGMAQ96B86 450 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 DCLRE1CQ96SD1 692 aaKnown RBP4.66□□□□□ -1.66
PTPRD-203ENST00000381196 SLC2A4RGQ9NR83 387 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 TAS2R10Q9NYW0 307 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 COPS7AQ9UBW8 275 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 MED16Q9Y2X0 877 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 PI4KAP42356 2102 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 A0A1W2PQ45 241 aaPredicted RBP4.66□□□□□ -1.66
PTPRD-203ENST00000381196 A0A1W2PQY0 241 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 TMEM150BA6NC51 233 aa4.66□□□□□ -1.66
PTPRD-203ENST00000381196 LRCH4O75427 683 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms