RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 KCNC4Q03721 635 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 LASP1Q14847 261 aaKnown RBP10.22□□□□□ -0.77
NEDD9-201ENST00000379433 TOR1AIP1Q5JTV8 583 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 CYP4Z1Q86W10 505 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 METTL4Q8N3J2 472 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 UBE2E3Q969T4 207 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 HSPBAP1Q96EW2 488 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 BMFQ96LC9 184 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 MRPS26Q9BYN8 205 aaKnown RBP10.22□□□□□ -0.77
NEDD9-201ENST00000379433 ZCCHC3Q9NUD5 404 aaKnown RBP10.22□□□□□ -0.77
NEDD9-201ENST00000379433 DDX28Q9NUL7 540 aaKnown RBP10.22□□□□□ -0.77
NEDD9-201ENST00000379433 ADPRHL2Q9NX46 363 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 THUMPD1Q9NXG2 353 aaKnown RBP10.22□□□□□ -0.77
NEDD9-201ENST00000379433 ASIC5Q9NY37 505 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 CLCA2Q9UQC9 943 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 MAN2B2Q9Y2E5 1009 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 ATG4BQ9Y4P1 393 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 PCDHGA10Q9Y5H3 936 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 C4orf51C9J302 202 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 PSMD9O00233 223 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 AP3D1O14617 1153 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 PDPK1O15530 556 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 CDC123O75794 336 aaPredicted RBP10.22□□□□□ -0.77
NEDD9-201ENST00000379433 OR12D1P0DN82 309 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 CAPZA2P47755 286 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 RACK1P63244 317 aaKnown RBP10.22□□□□□ -0.77
NEDD9-201ENST00000379433 TXNL4AP83876 142 aaKnown RBP10.22□□□□□ -0.77
NEDD9-201ENST00000379433 MTAPQ13126 283 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 SPCS2Q15005 226 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 GCNT6Q5T4J0 391 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 SLC6A19Q695T7 634 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 LCTLQ6UWM7 567 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 ZNF793Q6ZN11 406 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 R3HCC1LQ7Z5L2 792 aaKnown RBP10.22□□□□□ -0.77
NEDD9-201ENST00000379433 SPRED1Q7Z699 444 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 AMIGO1Q86WK6 493 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 LAS2Q8IYD9 372 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 C8orf59Q8N0T1 100 aaPredicted RBP10.22□□□□□ -0.77
NEDD9-201ENST00000379433 FAM46DQ8NEK8 389 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 OR9Q2Q8NGE9 314 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 PHF21AQ96BD5 680 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 TM4SF18Q96CE8 201 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 TMEM184CQ9NVA4 438 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 TTC28Q96AY4 2481 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 OR2W5A6NFC9 320 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 ACOD1A6NK06 481 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 FRS3O43559 492 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 SLC28A2O43868 658 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 DNAJB6O75190 326 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 KLHL18O94889 574 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 VIPP01282 170 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 CTSEP14091 401 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 GABRG2P18507 467 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 GZMMP51124 257 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 NUDT6P53370 316 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 HEPACAMQ14CZ8 416 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 GPR19Q15760 415 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 DUSP7Q16829 419 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 TMEM107Q6UX40 140 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 KCTD8Q6ZWB6 473 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 USP51Q70EK9 711 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 KCTD20Q7Z5Y7 419 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 NUDT13Q86X67 352 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 RBM45Q8IUH3 476 aaKnown RBP10.22□□□□□ -0.77
NEDD9-201ENST00000379433 TAGAPQ8N103 731 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 ZCCHC7Q8N3Z6 543 aaKnown RBP10.22□□□□□ -0.77
NEDD9-201ENST00000379433 HORMAD2Q8N7B1 307 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 FBXO15Q8NCQ5 510 aaPredicted RBP10.22□□□□□ -0.77
NEDD9-201ENST00000379433 OR10Z1Q8NGY1 313 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 TANKQ92844 425 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 RGMAQ96B86 450 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 DUS3LQ96G46 650 aaKnown RBP10.22□□□□□ -0.77
NEDD9-201ENST00000379433 UCN2Q96RP3 112 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 SEC22CQ9BRL7 303 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 MS4A8Q9BY19 250 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 SLC6A20Q9NP91 592 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 RLIMQ9NVW2 624 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 FAM118AQ9NWS6 357 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 ZNF282Q9UDV7 671 aaPredicted RBP10.22□□□□□ -0.77
NEDD9-201ENST00000379433 EBF1Q9UH73 591 aa10.22□□□□□ -0.77
NEDD9-201ENST00000379433 ZNF106Q9H2Y7 1883 aaKnown RBP10.21□□□□□ -0.77
NEDD9-201ENST00000379433 CCRL2O00421 344 aa10.21□□□□□ -0.77
NEDD9-201ENST00000379433 CAPN5O15484 640 aaPredicted RBP10.21□□□□□ -0.77
NEDD9-201ENST00000379433 SEMA4FO95754 770 aa10.21□□□□□ -0.77
NEDD9-201ENST00000379433 GPX2P18283 190 aa10.21□□□□□ -0.77
NEDD9-201ENST00000379433 IL1RNP18510 177 aa10.21□□□□□ -0.77
NEDD9-201ENST00000379433 CXCR2P25025 360 aa10.21□□□□□ -0.77
NEDD9-201ENST00000379433 NOS3P29474 1203 aa10.21□□□□□ -0.77
NEDD9-201ENST00000379433 ALDH4A1P30038 563 aa10.21□□□□□ -0.77
NEDD9-201ENST00000379433 TAGLN2P37802 199 aaKnown RBP10.21□□□□□ -0.77
NEDD9-201ENST00000379433 EIF2DP41214 584 aaKnown RBP10.21□□□□□ -0.77
NEDD9-201ENST00000379433 NR1H2P55055 460 aa10.21□□□□□ -0.77
NEDD9-201ENST00000379433 ESRRGP62508 458 aa10.21□□□□□ -0.77
NEDD9-201ENST00000379433 SIM1P81133 766 aaPredicted RBP10.21□□□□□ -0.77
NEDD9-201ENST00000379433 FAM71E1Q6IPT2 247 aa10.21□□□□□ -0.77
NEDD9-201ENST00000379433 C11orf88Q6PI97 169 aa10.21□□□□□ -0.77
NEDD9-201ENST00000379433 KLHL17Q6TDP4 642 aa10.21□□□□□ -0.77
NEDD9-201ENST00000379433 CALHM3Q86XJ0 350 aa10.21□□□□□ -0.77
NEDD9-201ENST00000379433 METTL27Q8N6F8 245 aaPredicted RBP10.21□□□□□ -0.77
NEDD9-201ENST00000379433 SMRP1Q8NCR6 262 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms