RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 NLGN3Q9NZ94 848 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 FZD10Q9ULW2 581 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 SMIM28A0A1B0GU29 152 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 CPED1A4D0V7 1026 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 ENGP17813 658 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 GIFP27352 417 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 VIPR1P32241 457 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 MPIP34949 423 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 ARF5P84085 180 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 SLC22A10Q63ZE4 541 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 OTOP2Q7RTS6 562 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 GLT6D1Q7Z4J2 308 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 PTCHD1Q96NR3 888 aa11.23□□□□□ -0.61
NPHP4-202ENST00000378161 LSM7Q9UK45 103 aaKnown RBP11.23□□□□□ -0.61
NPHP4-202ENST00000378161 IRGMA1A4Y4 181 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 TMEM210A6NLX4 147 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 GPR31O00270 319 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 SOCS7O14512 581 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 DSCR3O14972 297 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 CREG1O75629 220 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 RHOCP08134 193 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 SRPRAP08240 638 aaKnown RBP11.22□□□□□ -0.61
NPHP4-202ENST00000378161 TYRP14679 529 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 CPT2P23786 658 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 DSC2Q02487 901 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 C14orf28Q4W4Y0 310 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 ACER2Q5QJU3 275 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 TREML2Q5T2D2 321 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 PRSS55Q6UWB4 352 aaPredicted RBP11.22□□□□□ -0.61
NPHP4-202ENST00000378161 ENPP6Q6UWR7 440 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 TMUB2Q71RG4 321 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 C16orf78Q8WTQ4 265 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 CORO2AQ92828 525 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 PYCR2Q96C36 320 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 TRMT61AQ96FX7 289 aaKnown RBP11.22□□□□□ -0.61
NPHP4-202ENST00000378161 KRCC1Q9NPI7 259 aaPredicted RBP11.22□□□□□ -0.61
NPHP4-202ENST00000378161 OR2T1O43869 369 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 EFCAB14O75071 495 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 LATS1O95835 1130 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 ALDOCP09972 364 aaKnown RBP11.22□□□□□ -0.61
NPHP4-202ENST00000378161 ZNF7P17097 686 aaPredicted RBP11.22□□□□□ -0.61
NPHP4-202ENST00000378161 NMBRP28336 390 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 THPOP40225 353 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 DIO1P49895 249 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 TAS2R39P59534 338 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 OR2B8PP59922 312 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 CLDN10P78369 228 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 VLDLRP98155 873 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 TLE2Q04725 743 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 RBM39Q14498 530 aaKnown RBP11.22□□□□□ -0.61
NPHP4-202ENST00000378161 CES4AQ5XG92 561 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 NCBP2-AS2Q69YL0 99 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 CYS1Q717R9 158 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 WDR53Q7Z5U6 358 aaPredicted RBP11.22□□□□□ -0.61
NPHP4-202ENST00000378161 IQCHQ86VS3 1027 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 PQLC3Q8N755 202 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 OR10D4PQ8NGN7 298 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 HUS1BQ8NHY5 278 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 CD300LFQ8TDQ1 290 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 TMEM174Q8WUU8 243 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 SPACA1Q9HBV2 294 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 TLR9Q9NR96 1032 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 TLR8Q9NR97 1041 aaKnown RBP11.22□□□□□ -0.61
NPHP4-202ENST00000378161 UXTQ9UBK9 157 aaPredicted RBP11.22□□□□□ -0.61
NPHP4-202ENST00000378161 PCDHB7Q9Y5E2 793 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 KLF2Q9Y5W3 355 aaPredicted RBP11.22□□□□□ -0.61
NPHP4-202ENST00000378161 IRAK3Q9Y616 596 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 A0A087WZY1 265 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 PMS2P1A4D2B8 440 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 TMEM200CA6NKL6 621 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 PRKYO43930 277 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 SEC22BO75396 215 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 IFNGP01579 166 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 ACPPP15309 386 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 EFNA1P20827 205 aaPredicted RBP11.22□□□□□ -0.61
NPHP4-202ENST00000378161 GJA5P36382 358 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 HTR4Q13639 388 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 PTPRCAPQ14761 206 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 DPY19L2P1Q6NXN4 242 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 B3GLCTQ6Y288 498 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 CACUL1Q86Y37 369 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 CRYBG2Q8N1P7 616 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 MARVELD1Q9BSK0 173 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 NFKBIZQ9BYH8 718 aa11.22□□□□□ -0.61
NPHP4-202ENST00000378161 MYO5AQ9Y4I1 1855 aaKnown RBP11.22□□□□□ -0.61
NPHP4-202ENST00000378161 PPM1DO15297 605 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 F2P00734 622 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 HTR1AP08908 422 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 ATXN1LP0C7T5 689 aaKnown RBP11.21□□□□□ -0.61
NPHP4-202ENST00000378161 NUMBP49757 651 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 PSEN2P49810 448 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 RAB8AP61006 207 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 MPPED2Q15777 294 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 LGALSLQ3ZCW2 172 aaPredicted RBP11.21□□□□□ -0.61
NPHP4-202ENST00000378161 HECTD2Q5U5R9 776 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 LAMTOR1Q6IAA8 161 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 BAIAP2L2Q6UXY1 529 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 KLHDC8BQ8IXV7 354 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 STK40Q8N2I9 435 aa11.21□□□□□ -0.61
NPHP4-202ENST00000378161 DTWD1Q8N5C7 304 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms