RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 LAMP1P11279 417 aa12.27□□□□□ -0.45
CKAP2-202ENST00000378034 CD96P40200 585 aa12.27□□□□□ -0.45
CKAP2-202ENST00000378034 PSPHP78330 225 aa12.27□□□□□ -0.45
CKAP2-202ENST00000378034 MRPS35P82673 323 aaKnown RBP12.27□□□□□ -0.45
CKAP2-202ENST00000378034 GUCY1A3Q02108 690 aa12.27□□□□□ -0.45
CKAP2-202ENST00000378034 ZNF169Q14929 603 aaPredicted RBP12.27□□□□□ -0.45
CKAP2-202ENST00000378034 RPS6KA2Q15349 733 aa12.27□□□□□ -0.45
CKAP2-202ENST00000378034 NADK2Q4G0N4 442 aa12.27□□□□□ -0.45
CKAP2-202ENST00000378034 FHL5Q5TD97 284 aa12.27□□□□□ -0.45
CKAP2-202ENST00000378034 OPN5Q6U736 354 aa12.27□□□□□ -0.45
CKAP2-202ENST00000378034 TMEM156Q8N614 296 aa12.27□□□□□ -0.45
CKAP2-202ENST00000378034 ZNF441Q8N8Z8 693 aa12.27□□□□□ -0.45
CKAP2-202ENST00000378034 GLB1L3Q8NCI6 653 aaPredicted RBP12.27□□□□□ -0.45
CKAP2-202ENST00000378034 OR52R1Q8NGF1 315 aa12.27□□□□□ -0.45
CKAP2-202ENST00000378034 OR8J2Q8NGG1 315 aa12.27□□□□□ -0.45
CKAP2-202ENST00000378034 KAT2AQ92830 837 aa12.27□□□□□ -0.45
CKAP2-202ENST00000378034 CIDECQ96AQ7 238 aaPredicted RBP12.27□□□□□ -0.45
CKAP2-202ENST00000378034 ELP4Q96EB1 424 aa12.27□□□□□ -0.45
CKAP2-202ENST00000378034 RASL10BQ96S79 203 aa12.27□□□□□ -0.45
CKAP2-202ENST00000378034 DUSP26Q9BV47 211 aa12.27□□□□□ -0.45
CKAP2-202ENST00000378034 MFRPQ9BY79 579 aa12.27□□□□□ -0.45
CKAP2-202ENST00000378034 TAS2R9Q9NYW1 312 aa12.27□□□□□ -0.45
CKAP2-202ENST00000378034 C19orf53Q9UNZ5 99 aaPredicted RBP12.27□□□□□ -0.45
CKAP2-202ENST00000378034 HEMK1Q9Y5R4 338 aaPredicted RBP12.27□□□□□ -0.45
CKAP2-202ENST00000378034 A0A1W2PRB8 838 aa12.26□□□□□ -0.45
CKAP2-202ENST00000378034 GPC1P35052 558 aa12.26□□□□□ -0.45
CKAP2-202ENST00000378034 EMDP50402 254 aa12.26□□□□□ -0.45
CKAP2-202ENST00000378034 OC90Q02509 493 aaPredicted RBP12.26□□□□□ -0.45
CKAP2-202ENST00000378034 EXOSC7Q15024 291 aaKnown RBP12.26□□□□□ -0.45
CKAP2-202ENST00000378034 PLEKHN1Q494U1 663 aaPredicted RBP12.26□□□□□ -0.45
CKAP2-202ENST00000378034 PDCD4Q53EL6 469 aaKnown RBP12.26□□□□□ -0.45
CKAP2-202ENST00000378034 RPUSD3Q6P087 351 aaKnown RBP12.26□□□□□ -0.45
CKAP2-202ENST00000378034 TAGAPQ8N103 731 aa12.26□□□□□ -0.45
CKAP2-202ENST00000378034 OR2L13Q8N349 312 aa12.26□□□□□ -0.45
CKAP2-202ENST00000378034 MDS2Q8NDY4 140 aa12.26□□□□□ -0.45
CKAP2-202ENST00000378034 OR7G2Q8NG99 324 aa12.26□□□□□ -0.45
CKAP2-202ENST00000378034 ASB15Q8WXK1 588 aa12.26□□□□□ -0.45
CKAP2-202ENST00000378034 OR5P2Q8WZ92 322 aa12.26□□□□□ -0.45
CKAP2-202ENST00000378034 ADIPOR1Q96A54 375 aa12.26□□□□□ -0.45
CKAP2-202ENST00000378034 GAL3ST4Q96RP7 486 aa12.26□□□□□ -0.45
CKAP2-202ENST00000378034 CLMPQ9H6B4 373 aa12.26□□□□□ -0.45
CKAP2-202ENST00000378034 LRFN1Q9P244 771 aa12.26□□□□□ -0.45
CKAP2-202ENST00000378034 COL6A6A6NMZ7 2263 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 C1QL1O75973 258 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 PRB1P04280 392 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 CD46P15529 392 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 GPX3P22352 226 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 PTGER1P34995 402 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 MC3RP41968 323 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 KIR3DL1P43629 444 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 PPICP45877 212 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 MRPL19P49406 292 aaKnown RBP12.25□□□□□ -0.45
CKAP2-202ENST00000378034 C19orf57Q0VDD7 668 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 HSPB3Q12988 150 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 DUSP8Q13202 625 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 OR1C1Q15619 314 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 ANXA8L1Q5VT79 327 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 TMEM107Q6UX40 140 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 ZNF551Q7Z340 670 aaPredicted RBP12.25□□□□□ -0.45
CKAP2-202ENST00000378034 CATSPER1Q8NEC5 780 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 VPS37AQ8NEZ2 397 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 PSMA8Q8TAA3 256 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 ZBTB18Q99592 522 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 LIN28AQ9H9Z2 209 aaKnown RBP12.25□□□□□ -0.45
CKAP2-202ENST00000378034 C3orf14Q9HBI5 128 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 SDR39U1Q9NRG7 319 aaPredicted RBP12.25□□□□□ -0.45
CKAP2-202ENST00000378034 DDX18Q9NVP1 670 aaKnown RBP12.25□□□□□ -0.45
CKAP2-202ENST00000378034 ZIM2Q9NZV7 527 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 NTMQ9P121 344 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 CSAG2Q9Y5P2 127 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 TTC36A6NLP5 189 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 A8MVJ9 347 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 E9PBE3 544 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 ACOX3O15254 700 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 SUV39H1O43463 412 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 SORBS2O94875 1100 aaKnown RBP12.25□□□□□ -0.45
CKAP2-202ENST00000378034 PSMG1O95456 288 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 VIMP08670 466 aaKnown RBP12.25□□□□□ -0.45
CKAP2-202ENST00000378034 TROVE2P10155 538 aaKnown RBP eCLIP12.25□□□□□ -0.45
CKAP2-202ENST00000378034 DRD5P21918 477 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 NRG3P56975 720 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 INAQ16352 499 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 PGS1Q32NB8 556 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 ZNF468Q5VIY5 522 aaPredicted RBP12.25□□□□□ -0.45
CKAP2-202ENST00000378034 TMEM125Q96AQ2 219 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 HSPBAP1Q96EW2 488 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 LCORQ96JN0 433 aaPredicted RBP12.25□□□□□ -0.45
CKAP2-202ENST00000378034 SGCZQ96LD1 299 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 C5orf34Q96MH7 638 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 EBF4Q9BQW3 602 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 NEUROD4Q9HD90 331 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 NPHS2Q9NP85 383 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 HPF1Q9NWY4 346 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 PCDHGA10Q9Y5H3 936 aa12.25□□□□□ -0.45
CKAP2-202ENST00000378034 CAPN14A8MX76 684 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 UPK1AO00322 258 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 RNASET2O00584 256 aaKnown RBP12.24□□□□□ -0.45
CKAP2-202ENST00000378034 RRP9O43818 475 aaKnown RBP12.24□□□□□ -0.45
CKAP2-202ENST00000378034 SLC22A3O75751 556 aa12.24□□□□□ -0.45
CKAP2-202ENST00000378034 NEURL1O76050 574 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms