RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 WASHC1A8K0Z3 465 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 LEFTY2O00292 366 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 HPGDSO60760 199 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 GPX2P18283 190 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 ACADLP28330 430 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 AP2S1P53680 142 aaPredicted RBP8.34□□□□□ -1.07
PCDH9-202ENST00000377865 TAS2R38P59533 333 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 TMEM69Q5SWH9 247 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 TXNDC8Q6A555 127 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 OR4C11Q6IEV9 310 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 RAB12Q6IQ22 244 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 IQCF1Q8N6M8 205 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 NUP43Q8NFH3 380 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 OR7G3Q8NG95 312 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 SNIP1Q8TAD8 396 aaKnown RBP8.34□□□□□ -1.07
PCDH9-202ENST00000377865 SFXN5Q8TD22 340 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 CIDECQ96AQ7 238 aaPredicted RBP8.34□□□□□ -1.07
PCDH9-202ENST00000377865 CDADC1Q9BWV3 514 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 SCP2D1Q9UJQ7 156 aa8.34□□□□□ -1.07
PCDH9-202ENST00000377865 GLTPD2A6NH11 291 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 ELOA3DA6NLF2 546 aaPredicted RBP8.33□□□□□ -1.08
PCDH9-202ENST00000377865 A8MU76 341 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 CLDN4O14493 209 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 ADAM23O75077 832 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 CSO75390 466 aaKnown RBP8.33□□□□□ -1.08
PCDH9-202ENST00000377865 PRR35P0CG20 571 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 TGM1P22735 817 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 AOAHP28039 575 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 PSPHP78330 225 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 BTN3A2P78410 334 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 FAM189BP81408 668 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 MEF2AQ02078 507 aaPredicted RBP8.33□□□□□ -1.08
PCDH9-202ENST00000377865 LRIT3Q3SXY7 679 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 ELOA3BQ3SY89 546 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 ZNF627Q7L945 461 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 TPRA1Q86W33 373 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 FAM86B1Q8N7N1 296 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 DBF4BQ8NFT6 615 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 ELOA3Q8NG57 546 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 ZCCHC10Q8TBK6 192 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 ASB11Q8WXH4 323 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.33□□□□□ -1.08
PCDH9-202ENST00000377865 TNFRSF12AQ9NP84 129 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 EMC7Q9NPA0 242 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 TAS2R8Q9NYW2 309 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 IQCMA0A1B0GVH7 501 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 TAPBPO15533 448 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 AK1P00568 194 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 SOD2P04179 222 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 APODP05090 189 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 C8AP07357 584 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 ETV3P41162 512 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 CTBP2P56545 445 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 ZNF91Q05481 1191 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 GK2Q14410 553 aaPredicted RBP8.33□□□□□ -1.08
PCDH9-202ENST00000377865 FAM189A2Q15884 450 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 CTF1Q16619 201 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 RPS26P11Q5JNZ5 115 aaPredicted RBP8.33□□□□□ -1.08
PCDH9-202ENST00000377865 LCTLQ6UWM7 567 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 CACUL1Q86Y37 369 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 LAX1Q8IWV1 398 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 FTMTQ8N4E7 242 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 CAMKVQ8NCB2 501 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 CHST4Q8NCG5 386 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 OR52P1PQ8NH57 321 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 SRMSQ9H3Y6 488 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 ACTL8Q9H568 366 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 WDR26Q9H7D7 661 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 ACSL5Q9ULC5 683 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 A0A0G2JN53 185 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 IGLV3-25P01717 112 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 HLA-EP13747 358 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 RRAS2P62070 204 aaPredicted RBP8.33□□□□□ -1.08
PCDH9-202ENST00000377865 FAPQ12884 760 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 LRRC26Q2I0M4 334 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 XAF1Q6GPH4 301 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 SPERTQ8NA61 448 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 FAM46AQ96IP4 442 aaKnown RBP8.33□□□□□ -1.08
PCDH9-202ENST00000377865 CNN2Q99439 309 aaKnown RBP8.33□□□□□ -1.08
PCDH9-202ENST00000377865 HOXD1Q9GZZ0 328 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 P2RY12Q9H244 342 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 TMEM38AQ9H6F2 299 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 EVA1AQ9H8M9 152 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 MED17Q9NVC6 651 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 ELOVL2Q9NXB9 296 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 LHX3Q9UBR4 397 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 ACTL7AQ9Y615 435 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 DOCK1Q14185 1865 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 H0YIV9 168 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 FOXE1O00358 373 aaPredicted RBP8.33□□□□□ -1.08
PCDH9-202ENST00000377865 TEX28O15482 410 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 RBBP9O75884 186 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 EPHX1P07099 455 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 UCHL1P09936 223 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 CTSEP14091 401 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 TRA2BP62995 288 aaKnown RBP8.33□□□□□ -1.08
PCDH9-202ENST00000377865 ILKQ13418 452 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 ESCO2Q56NI9 601 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 FBXO42Q6P3S6 717 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 Q6ZVL8 140 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms