RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 GABARAPL1Q9H0R8 117 aa14.73□□□□□ -0.05
FXN-201ENST00000377270 RNF208Q9H0X6 261 aa14.73□□□□□ -0.05
FXN-201ENST00000377270 DNTTIP1Q9H147 329 aa14.73□□□□□ -0.05
FXN-201ENST00000377270 IL26Q9NPH9 171 aa14.73□□□□□ -0.05
FXN-201ENST00000377270 HCN3Q9P1Z3 774 aa14.73□□□□□ -0.05
FXN-201ENST00000377270 GHRLQ9UBU3 117 aa14.73□□□□□ -0.05
FXN-201ENST00000377270 LSM7Q9UK45 103 aaKnown RBP14.73□□□□□ -0.05
FXN-201ENST00000377270 PRSS21Q9Y6M0 314 aa14.73□□□□□ -0.05
FXN-201ENST00000377270 PSMD9O00233 223 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 CXCR6O00574 342 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 PER2O15055 1255 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 WBP4O75554 376 aaKnown RBP14.72□□□□□ -0.05
FXN-201ENST00000377270 SLC25A14O95258 325 aaPredicted RBP14.72□□□□□ -0.05
FXN-201ENST00000377270 TRBC1P01850 177 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 LPLP06858 475 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 FGF2P09038 288 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 CSF3P09919 207 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 DAPP51397 102 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 ATP12AP54707 1039 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 ELP6Q0PNE2 266 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 CPZQ66K79 652 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 SBSNQ6UWP8 590 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 Q6ZSR9 355 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 GOLGA7Q7Z5G4 137 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 PRR18Q8N4B5 295 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 NANOGP1Q8N7R0 232 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 OR10A6Q8NH74 314 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 CHCHD6Q9BRQ6 235 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 NKX6-2Q9C056 277 aaPredicted RBP14.72□□□□□ -0.05
FXN-201ENST00000377270 SPG21Q9NZD8 308 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 CFAP97Q9P2B7 532 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 BTNL2Q9UIR0 455 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 MBD1Q9UIS9 605 aaPredicted RBP14.72□□□□□ -0.05
FXN-201ENST00000377270 LAMA2P24043 3122 aaKnown RBP14.72□□□□□ -0.05
FXN-201ENST00000377270 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.72□□□□□ -0.05
FXN-201ENST00000377270 POM121CA8CG34 1229 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 TCAPO15273 167 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 FFAR2O15552 330 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 PLOD3O60568 738 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 CNPP09543 421 aaKnown RBP14.72□□□□□ -0.05
FXN-201ENST00000377270 VEGFCP49767 419 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 MEF2AQ02078 507 aaPredicted RBP14.72□□□□□ -0.05
FXN-201ENST00000377270 NFATC2Q13469 925 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 CHRNA6Q15825 494 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 MAPKAPK3Q16644 382 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 AKIRIN2Q53H80 203 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 ARHGAP11AQ6P4F7 1023 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 IL27RAQ6UWB1 636 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 LKAAEAR1Q8TD35 194 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 VWCEQ96DN2 955 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 ZNF436Q9C0F3 470 aaPredicted RBP14.72□□□□□ -0.05
FXN-201ENST00000377270 C11orf49Q9H6J7 331 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 DCAF13Q9NV06 445 aaKnown RBP14.72□□□□□ -0.05
FXN-201ENST00000377270 VNN3Q9NY84 501 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 ZNF624Q9P2J8 865 aaPredicted RBP14.72□□□□□ -0.05
FXN-201ENST00000377270 NEUROG3Q9Y4Z2 214 aa14.72□□□□□ -0.05
FXN-201ENST00000377270 A0A096LPI6 279 aa14.71□□□□□ -0.05
FXN-201ENST00000377270 ELOVL7A1L3X0 281 aa14.71□□□□□ -0.05
FXN-201ENST00000377270 A6NCN8 305 aa14.71□□□□□ -0.05
FXN-201ENST00000377270 SULT1C2O00338 296 aa14.71□□□□□ -0.05
FXN-201ENST00000377270 GPR171O14626 319 aa14.71□□□□□ -0.05
FXN-201ENST00000377270 HCN1O60741 890 aa14.71□□□□□ -0.05
FXN-201ENST00000377270 C21orf33P30042 268 aaPredicted RBP14.71□□□□□ -0.05
FXN-201ENST00000377270 GNG10P50151 68 aa14.71□□□□□ -0.05
FXN-201ENST00000377270 HTR6P50406 440 aa14.71□□□□□ -0.05
FXN-201ENST00000377270 SNRPEP62304 92 aaKnown RBP14.71□□□□□ -0.05
FXN-201ENST00000377270 SEMG2Q02383 582 aa14.71□□□□□ -0.05
FXN-201ENST00000377270 LMAN2Q12907 356 aa14.71□□□□□ -0.05
FXN-201ENST00000377270 GTF2H2Q13888 395 aa14.71□□□□□ -0.05
FXN-201ENST00000377270 PCBP2Q15366 365 aaKnown RBP eCLIP14.71□□□□□ -0.05
FXN-201ENST00000377270 GTF2H2CQ6P1K8 395 aa14.71□□□□□ -0.05
FXN-201ENST00000377270 GAREM2Q75VX8 874 aa14.71□□□□□ -0.05
FXN-201ENST00000377270 DDX53Q86TM3 631 aaKnown RBP14.71□□□□□ -0.05
FXN-201ENST00000377270 OR4F6Q8NGB9 312 aa14.71□□□□□ -0.05
FXN-201ENST00000377270 UBE2FQ969M7 185 aa14.71□□□□□ -0.05
FXN-201ENST00000377270 ZNF689Q96CS4 500 aaPredicted RBP14.71□□□□□ -0.05
FXN-201ENST00000377270 C14orf144Q96I85 54 aa14.71□□□□□ -0.05
FXN-201ENST00000377270 MEGF10Q96KG7 1140 aa14.71□□□□□ -0.05
FXN-201ENST00000377270 COQ10AQ96MF6 247 aa14.71□□□□□ -0.05
FXN-201ENST00000377270 BARD1Q99728 777 aaKnown RBP14.71□□□□□ -0.05
FXN-201ENST00000377270 SOX7Q9BT81 388 aa14.71□□□□□ -0.05
FXN-201ENST00000377270 NSUN3Q9H649 340 aaKnown RBP14.71□□□□□ -0.05
FXN-201ENST00000377270 MED9Q9NWA0 146 aa14.71□□□□□ -0.05
FXN-201ENST00000377270 VSX1Q9NZR4 365 aaPredicted RBP14.71□□□□□ -0.05
FXN-201ENST00000377270 SLC6A5Q9Y345 797 aa14.71□□□□□ -0.05
FXN-201ENST00000377270 DMRT1Q9Y5R6 373 aa14.71□□□□□ -0.05
FXN-201ENST00000377270 A0A075B6Q4 140 aa14.71□□□□□ -0.06
FXN-201ENST00000377270 OR7A17O14581 309 aa14.71□□□□□ -0.06
FXN-201ENST00000377270 KDM4BO94953 1096 aa14.71□□□□□ -0.06
FXN-201ENST00000377270 MBP02144 154 aa14.71□□□□□ -0.06
FXN-201ENST00000377270 BPIP17213 487 aa14.71□□□□□ -0.06
FXN-201ENST00000377270 CD70P32970 193 aa14.71□□□□□ -0.06
FXN-201ENST00000377270 CD79BP40259 229 aa14.71□□□□□ -0.06
FXN-201ENST00000377270 PTGFRP43088 359 aa14.71□□□□□ -0.06
FXN-201ENST00000377270 RGS4P49798 205 aa14.71□□□□□ -0.06
FXN-201ENST00000377270 DEFB103AP81534 67 aa14.71□□□□□ -0.06
FXN-201ENST00000377270 KCNAB1Q14722 419 aa14.71□□□□□ -0.06
FXN-201ENST00000377270 LAPTM4AQ15012 233 aa14.71□□□□□ -0.06
FXN-201ENST00000377270 FCN2Q15485 313 aa14.71□□□□□ -0.06
FXN-201ENST00000377270 ZNF284Q2VY69 593 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms