RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 KCTD7Q96MP8 289 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 DEFB118Q96PH6 123 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 GDF15Q99988 308 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 TMEM246Q9BRR3 403 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 GLIPR2Q9H4G4 154 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 TM7SF3Q9NS93 570 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 SF3B6Q9Y3B4 125 aaKnown RBP12.48□□□□□ -0.41
ACTN1-202ENST00000376839 NOTCH4Q99466 2003 aa12.48□□□□□ -0.41
ACTN1-202ENST00000376839 C17orf113A0A1B0GUU1 675 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 CCDC182A6NF36 153 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 POLR1CO15160 346 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-202ENST00000376839 LZTS3O60299 673 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-202ENST00000376839 STATHP02808 62 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 CHRM4P08173 479 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 ALPPL2P10696 532 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 MYL12AP19105 171 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 KIR2DL3P43628 341 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.47□□□□□ -0.414e-6■■□□□ 13.3
ACTN1-202ENST00000376839 CRTC2Q53ET0 693 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-202ENST00000376839 SLC35F1Q5T1Q4 408 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 DDI2Q5TDH0 399 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 PDZD3Q86UT5 571 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 TRIM48Q8IWZ4 208 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 RDH10Q8IZV5 341 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 ZNF557Q8N988 423 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-202ENST00000376839 RASSF5Q8WWW0 418 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 TFGQ92734 400 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-202ENST00000376839 RNFT2Q96EX2 444 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 AIF1LQ9BQI0 150 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 QRSL1Q9H0R6 528 aaKnown RBP12.47□□□□□ -0.41
ACTN1-202ENST00000376839 SOX18P35713 384 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 PRKAG1P54619 331 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 FABP5Q01469 135 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 FUT5Q11128 374 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 MAP4K2Q12851 820 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 COX10Q12887 443 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 GPR19Q15760 415 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 PLK5Q496M5 336 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 Q5BKY6 102 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 C3orf38Q5JPI3 329 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 SLC25A30Q5SVS4 291 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 CD300LDQ6UXZ3 194 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 ANKRD33Q7Z3H0 272 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 GLCCI1Q86VQ1 547 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 DCUN1D3Q8IWE4 304 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 VWA5B2Q8N398 1253 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 TP53I13Q8NBR0 393 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-202ENST00000376839 PLA2G15Q8NCC3 412 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 ATP6V1C2Q8NEY4 427 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 OR8D4Q8NGM9 314 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 HCAR2Q8TDS4 363 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 SLC9A6Q92581 669 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 NXPE3Q969Y0 559 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 DCLRE1CQ96SD1 692 aaKnown RBP12.47□□□□□ -0.41
ACTN1-202ENST00000376839 ZCCHC3Q9NUD5 404 aaKnown RBP12.47□□□□□ -0.41
ACTN1-202ENST00000376839 TBC1D14Q9P2M4 693 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 MALT1Q9UDY8 824 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 GLOD5A6NK44 160 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 NDUFS4O43181 175 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 SCO2O43819 266 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 ADH1AP07327 375 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 RHOP08100 348 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 MYL9P24844 172 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 DMPKQ09013 629 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 NOGQ13253 232 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 COL9A2Q14055 689 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-202ENST00000376839 C1orf94Q6P1W5 598 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 NANOGNBQ7Z5D8 188 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 NUDT13Q86X67 352 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 GDPD1Q8N9F7 314 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 UBASH3BQ8TF42 649 aa12.47□□□□□ -0.41
ACTN1-202ENST00000376839 NDRG2Q9UN36 371 aaKnown RBP12.47□□□□□ -0.41
ACTN1-202ENST00000376839 HIDE1A8MVS5 230 aa12.46□□□□□ -0.41
ACTN1-202ENST00000376839 CACNB4O00305 520 aaPredicted RBP12.46□□□□□ -0.41
ACTN1-202ENST00000376839 LCMT2O60294 686 aaKnown RBP12.46□□□□□ -0.41
ACTN1-202ENST00000376839 LALBAP00709 142 aa12.46□□□□□ -0.41
ACTN1-202ENST00000376839 SERPIND1P05546 499 aa12.46□□□□□ -0.41
ACTN1-202ENST00000376839 RB1P06400 928 aa12.46□□□□□ -0.41
ACTN1-202ENST00000376839 CISD3P0C7P0 127 aa12.46□□□□□ -0.41
ACTN1-202ENST00000376839 NR2F6P10588 404 aa12.46□□□□□ -0.41
ACTN1-202ENST00000376839 ACP2P11117 423 aa12.46□□□□□ -0.41
ACTN1-202ENST00000376839 APEX1P27695 318 aaKnown RBP12.46□□□□□ -0.41
ACTN1-202ENST00000376839 PPM1AP35813 382 aa12.46□□□□□ -0.41
ACTN1-202ENST00000376839 BUD31P41223 144 aaPredicted RBP12.46□□□□□ -0.41
ACTN1-202ENST00000376839 SLC6A11P48066 632 aa12.46□□□□□ -0.41
ACTN1-202ENST00000376839 MAN2A2P49641 1150 aa12.46□□□□□ -0.41
ACTN1-202ENST00000376839 CD83Q01151 205 aa12.46□□□□□ -0.41
ACTN1-202ENST00000376839 GPAT3Q53EU6 434 aa12.46□□□□□ -0.41
ACTN1-202ENST00000376839 QSOX2Q6ZRP7 698 aa12.46□□□□□ -0.41
ACTN1-202ENST00000376839 AMDHD1Q96NU7 426 aa12.46□□□□□ -0.41
ACTN1-202ENST00000376839 LRRC3BQ96PB8 259 aa12.46□□□□□ -0.41
ACTN1-202ENST00000376839 AICDAQ9GZX7 198 aa12.46□□□□□ -0.41
ACTN1-202ENST00000376839 PELI2Q9HAT8 420 aa12.46□□□□□ -0.41
ACTN1-202ENST00000376839 MARK1Q9P0L2 795 aa12.46□□□□□ -0.41
ACTN1-202ENST00000376839 COMMD3Q9UBI1 195 aa12.46□□□□□ -0.41
ACTN1-202ENST00000376839 HEATR5BQ9P2D3 2071 aa12.46□□□□□ -0.41
ACTN1-202ENST00000376839 CHD7Q9P2D1 2997 aa12.46□□□□□ -0.42
ACTN1-202ENST00000376839 STK25O00506 426 aa12.46□□□□□ -0.42
ACTN1-202ENST00000376839 SEC14L5O43304 696 aa12.46□□□□□ -0.42
ACTN1-202ENST00000376839 FRS3O43559 492 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms