RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 ELK1P19419 428 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 POU6F2P78424 691 aaPredicted RBP15.6■□□□□ 0.09
TRIM39-201ENST00000376656 TAF1CQ15572 869 aaPredicted RBP15.6■□□□□ 0.09
TRIM39-201ENST00000376656 PXDC1Q5TGL8 231 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 HMGN2P46Q86SG4 172 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 KLHDC8AQ8IYD2 350 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 GHDCQ8N2G8 530 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 ARIH2OSQ8N7S6 290 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 ARL14EPQ8N8R7 260 aaPredicted RBP15.6■□□□□ 0.09
TRIM39-201ENST00000376656 ZNF740Q8NDX6 193 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 PCNPQ8WW12 178 aaKnown RBP15.6■□□□□ 0.09
TRIM39-201ENST00000376656 UCN3Q969E3 161 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 CASD1Q96PB1 797 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 ISYNA1Q9NPH2 558 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 TEX51A0A1B0GUA7 166 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 CIB4A0PJX0 185 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 CD8B2A6NJW9 211 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 SH3BP5O60239 455 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 B4GALT2O60909 372 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 CD8BP10966 210 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 CCND3P30281 292 aaPredicted RBP15.6■□□□□ 0.09
TRIM39-201ENST00000376656 SNRPD1P62314 119 aaKnown RBP15.6■□□□□ 0.09
TRIM39-201ENST00000376656 OLIG3Q7RTU3 272 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 TECPR1Q7Z6L1 1165 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 KIF18BQ86Y91 864 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 ZNF480Q8WV37 535 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 TMEM169Q96HH4 297 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 ZFP64Q9NPA5 681 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 RGS17Q9UGC6 210 aaPredicted RBP15.6■□□□□ 0.09
TRIM39-201ENST00000376656 NUP50Q9UKX7 468 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 I3L521 148 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 FOXE1O00358 373 aaPredicted RBP15.6■□□□□ 0.09
TRIM39-201ENST00000376656 GABRPO00591 440 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 PRODHO43272 600 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 NPPBP16860 134 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 PTBP1P26599 531 aaKnown RBP eCLIP15.6■□□□□ 0.093e-7■■■■□ 24.4
TRIM39-201ENST00000376656 SLC6A1P30531 599 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 MTNR1AP48039 350 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 ADAM15Q13444 863 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 ANGPT1Q15389 498 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 IQCF2Q8IXL9 164 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 ZNF485Q8NCK3 441 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 OR11H4Q8NGC9 324 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 NEURL3Q96EH8 262 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 ABCG4Q9H172 646 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 MED28Q9H204 178 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 MRPS18AQ9NVS2 196 aaKnown RBP15.6■□□□□ 0.09
TRIM39-201ENST00000376656 EXTL2Q9UBQ6 330 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 SEC14L3Q9UDX4 400 aa15.6■□□□□ 0.09
TRIM39-201ENST00000376656 CASP8AP2Q9UKL3 1982 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 OR5K3A6NET4 321 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 TFPIP10646 304 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 HK1P19367 917 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 CTGFP29279 349 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 PBLDP30039 288 aaPredicted RBP15.59■□□□□ 0.09
TRIM39-201ENST00000376656 SLC6A11P48066 632 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 POU4F3Q15319 338 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 Q6ZVL8 140 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 HSD11B1LQ7Z5J1 315 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 OR11H7Q8NGC8 314 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 PIGUQ9H490 435 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 EVA1BQ9NVM1 165 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 ZNF222Q9UK12 451 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 GALTP07902 379 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 CELP19835 753 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 TLE2Q04725 743 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 RGS1Q08116 209 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 DUSP6Q16828 381 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 MZT2AQ6P582 158 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 RAET1EQ8TD07 263 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 FOLH1BQ9HBA9 442 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 MAN2C1Q9NTJ4 1040 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 ING4Q9UNL4 249 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 EXOSC1Q9Y3B2 195 aaKnown RBP15.59■□□□□ 0.09
TRIM39-201ENST00000376656 AUP1Q9Y679 476 aa15.59■□□□□ 0.09
TRIM39-201ENST00000376656 OR7A10O76100 309 aa15.58■□□□□ 0.09
TRIM39-201ENST00000376656 PLA1AQ53H76 456 aa15.58■□□□□ 0.09
TRIM39-201ENST00000376656 CCNJQ5T5M9 372 aa15.58■□□□□ 0.09
TRIM39-201ENST00000376656 SLC8B1Q6J4K2 584 aa15.58■□□□□ 0.09
TRIM39-201ENST00000376656 TMEM107Q6UX40 140 aa15.58■□□□□ 0.09
TRIM39-201ENST00000376656 SLC36A4Q6YBV0 504 aa15.58■□□□□ 0.09
TRIM39-201ENST00000376656 Q6ZNB5 142 aa15.58■□□□□ 0.09
TRIM39-201ENST00000376656 TMEM150AQ86TG1 271 aa15.58■□□□□ 0.09
TRIM39-201ENST00000376656 HEXA-AS1Q9H8Q6 139 aa15.58■□□□□ 0.09
TRIM39-201ENST00000376656 C5AR2Q9P296 337 aa15.58■□□□□ 0.09
TRIM39-201ENST00000376656 PCDH10Q9P2E7 1040 aa15.58■□□□□ 0.09
TRIM39-201ENST00000376656 TRAV6A0A075B6T7 132 aa15.58■□□□□ 0.08
TRIM39-201ENST00000376656 HMGN4O00479 90 aa15.58■□□□□ 0.08
TRIM39-201ENST00000376656 PDPK1O15530 556 aa15.58■□□□□ 0.08
TRIM39-201ENST00000376656 C1GALT1C1LP0DN25 315 aa15.58■□□□□ 0.08
TRIM39-201ENST00000376656 SLC1A3P43003 542 aa15.58■□□□□ 0.08
TRIM39-201ENST00000376656 SMSP52788 366 aa15.58■□□□□ 0.08
TRIM39-201ENST00000376656 SMIM11AP58511 58 aa15.58■□□□□ 0.08
TRIM39-201ENST00000376656 BTG1P62324 171 aa15.58■□□□□ 0.08
TRIM39-201ENST00000376656 COX10Q12887 443 aa15.58■□□□□ 0.08
TRIM39-201ENST00000376656 HSPB3Q12988 150 aa15.58■□□□□ 0.08
TRIM39-201ENST00000376656 ZDHHC20Q5W0Z9 365 aa15.58■□□□□ 0.08
TRIM39-201ENST00000376656 TXNDC8Q6A555 127 aa15.58■□□□□ 0.08
TRIM39-201ENST00000376656 SLC51BQ86UW2 128 aa15.58■□□□□ 0.08
TRIM39-201ENST00000376656 LRRC17Q8N6Y2 441 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms