RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 TLX2O43763 284 aaPredicted RBP10.06□□□□□ -0.8
ABCF1-202ENST00000376545 CHRM4P08173 479 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 TRAPPC2P0DI81 140 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 TRAPPC2BP0DI82 140 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 ACP2P11117 423 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 GSTM3P21266 225 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 P2RY2P41231 377 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 CDK3Q00526 305 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 UBE3AQ05086 875 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 RAB40BQ12829 278 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 HYAL2Q12891 473 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 C1DQ13901 141 aaKnown RBP10.06□□□□□ -0.8
ABCF1-202ENST00000376545 GINS1Q14691 196 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 AGERQ15109 404 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 PLK5Q496M5 336 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 KLHL22Q53GT1 634 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 MRM1Q6IN84 353 aaKnown RBP10.06□□□□□ -0.8
ABCF1-202ENST00000376545 CD200R1LQ6Q8B3 271 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 GRASPQ7Z6J2 395 aaPredicted RBP10.06□□□□□ -0.8
ABCF1-202ENST00000376545 SLC7A5P1Q8MH63 180 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 CACTIN-AS1Q8N1I8 211 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 IQCF1Q8N6M8 205 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 OR5D16Q8NGK9 328 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 OR6T1Q8NGN1 323 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 SP7Q8TDD2 431 aaPredicted RBP10.06□□□□□ -0.8
ABCF1-202ENST00000376545 ZNF707Q96C28 371 aaPredicted RBP10.06□□□□□ -0.8
ABCF1-202ENST00000376545 DPH7Q9BTV6 452 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 SPATA5L1Q9BVQ7 753 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 NEK6Q9HC98 313 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 SLC35C2Q9NQQ7 365 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 SNTG1Q9NSN8 517 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 A0A0G2JPF8 293 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 A8MU76 341 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 HNRNPCL2B2RXH8 293 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 HNRNPCL3B7ZW38 293 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 PLD2O14939 933 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 EPHX1P07099 455 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 HNRNPCL4P0DMR1 293 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 IL7P13232 177 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 TNNI3P19429 210 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 KHKP50053 298 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 ASAH1Q13510 395 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 ZNF234Q14588 700 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 NDUFA5Q16718 116 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 FNDC3BQ53EP0 1204 aaKnown RBP10.06□□□□□ -0.8
ABCF1-202ENST00000376545 FAM46CQ5VWP2 391 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 LIPKQ5VXJ0 399 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 NXNL2Q5VZ03 156 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 HSDL2Q6YN16 418 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 SUN3Q8TAQ9 357 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 TMEM163Q8TC26 289 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 NEDD4LQ96PU5 975 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 NELL2Q99435 816 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 FNDC11Q9BVV2 318 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 LGR4Q9BXB1 951 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 PINK1Q9BXM7 581 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 TM7SF3Q9NS93 570 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 LAMA3Q16787 3333 aa10.06□□□□□ -0.8
ABCF1-202ENST00000376545 IRGMA1A4Y4 181 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 OTOL1A6NHN0 477 aaPredicted RBP10.05□□□□□ -0.8
ABCF1-202ENST00000376545 KDM4EB2RXH2 506 aaPredicted RBP10.05□□□□□ -0.8
ABCF1-202ENST00000376545 MYL12BO14950 172 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 CCNKO75909 580 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 EPCAMP16422 314 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 DDOSTP39656 456 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 NR4A2P43354 598 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 RPS5P46782 204 aaKnown RBP10.05□□□□□ -0.8
ABCF1-202ENST00000376545 SMSP52788 366 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 WNT4P56705 351 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 LSM11P83369 360 aaKnown RBP eCLIP10.05□□□□□ -0.8
ABCF1-202ENST00000376545 CEBPEQ15744 281 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 TMEM35AQ53FP2 167 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 PIP5KL1Q5T9C9 394 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 NDUFAF5Q5TEU4 345 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 XKRXQ6PP77 449 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 SPPL3Q8TCT6 385 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 CXorf40AQ8TE69 158 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 TM9SF4Q92544 642 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 NR4A3Q92570 626 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 KIAA1143Q96AT1 154 aaPredicted RBP10.05□□□□□ -0.8
ABCF1-202ENST00000376545 LRR1Q96L50 414 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 ARHGDIGQ99819 225 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 SOSTQ9BQB4 213 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 SARGQ9BW04 601 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 TEX101Q9BY14 249 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 EXOSC4Q9NPD3 245 aaKnown RBP10.05□□□□□ -0.8
ABCF1-202ENST00000376545 CES1P1Q9UKY3 287 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 SLC9A8Q9Y2E8 581 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 KLHL20Q9Y2M5 609 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 ASB4Q9Y574 426 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 N6AMT1Q9Y5N5 214 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 PRR19A6NJB7 356 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 GPR89AB7ZAQ6 455 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 SYT5O00445 386 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 PRODHO43272 600 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 OR1F1O43749 312 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 GPR89BP0CG08 455 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 NR2F1P10589 423 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 PPP2R1BP30154 601 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 FGF9P31371 208 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms