RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 DOLPP1Q86YN1 238 aa14.35□□□□□ -0.11
SDHB-201ENST00000375499 PRR22Q8IZ63 422 aa14.35□□□□□ -0.11
SDHB-201ENST00000375499 RIBC1Q8N443 379 aaPredicted RBP14.35□□□□□ -0.11
SDHB-201ENST00000375499 TMEM251Q8N6I4 163 aa14.35□□□□□ -0.11
SDHB-201ENST00000375499 FAM13CQ8NE31 585 aa14.35□□□□□ -0.11
SDHB-201ENST00000375499 EXOSC8Q96B26 276 aaKnown RBP14.35□□□□□ -0.11
SDHB-201ENST00000375499 CTHRC1Q96CG8 243 aa14.35□□□□□ -0.11
SDHB-201ENST00000375499 FAM111AQ96PZ2 611 aa14.35□□□□□ -0.11
SDHB-201ENST00000375499 FAM173AQ9BQD7 235 aa14.35□□□□□ -0.11
SDHB-201ENST00000375499 FAIM2Q9BWQ8 316 aa14.35□□□□□ -0.11
SDHB-201ENST00000375499 UTS2RQ9UKP6 389 aa14.35□□□□□ -0.11
SDHB-201ENST00000375499 CNOT11Q9UKZ1 510 aaKnown RBP14.35□□□□□ -0.11
SDHB-201ENST00000375499 POLR3HQ9Y535 204 aaPredicted RBP14.35□□□□□ -0.11
SDHB-201ENST00000375499 PDZD2O15018 2839 aa14.34□□□□□ -0.11
SDHB-201ENST00000375499 GNG14A0A1W2PPG7 69 aa14.34□□□□□ -0.11
SDHB-201ENST00000375499 GOLGA6L10A6NI86 522 aa14.34□□□□□ -0.11
SDHB-201ENST00000375499 P04436 131 aa14.34□□□□□ -0.11
SDHB-201ENST00000375499 CHRNGP07510 517 aa14.34□□□□□ -0.11
SDHB-201ENST00000375499 CSNK2A2P19784 350 aaPredicted RBP14.34□□□□□ -0.11
SDHB-201ENST00000375499 ALDH3A1P30838 453 aa14.34□□□□□ -0.11
SDHB-201ENST00000375499 ARRB2P32121 409 aa14.34□□□□□ -0.11
SDHB-201ENST00000375499 DEKP35659 375 aaKnown RBP14.34□□□□□ -0.11
SDHB-201ENST00000375499 FBXW4P57775 412 aa14.34□□□□□ -0.11
SDHB-201ENST00000375499 MAP4K2Q12851 820 aa14.34□□□□□ -0.11
SDHB-201ENST00000375499 GK5Q6ZS86 529 aa14.34□□□□□ -0.11
SDHB-201ENST00000375499 TRIM46Q7Z4K8 759 aa14.34□□□□□ -0.11
SDHB-201ENST00000375499 LRRC25Q8N386 305 aaPredicted RBP14.34□□□□□ -0.11
SDHB-201ENST00000375499 RPRMLQ8N4K4 120 aa14.34□□□□□ -0.11
SDHB-201ENST00000375499 SLC15A4Q8N697 577 aa14.34□□□□□ -0.11
SDHB-201ENST00000375499 OR9A2Q8NGT5 310 aa14.34□□□□□ -0.11
SDHB-201ENST00000375499 LURAP1Q96LR2 239 aa14.34□□□□□ -0.11
SDHB-201ENST00000375499 ITPAQ9BY32 194 aa14.34□□□□□ -0.11
SDHB-201ENST00000375499 PARD6BQ9BYG5 372 aa14.34□□□□□ -0.11
SDHB-201ENST00000375499 NXF5Q9H1B4 397 aaKnown RBP14.34□□□□□ -0.11
SDHB-201ENST00000375499 SIRT5Q9NXA8 310 aa14.34□□□□□ -0.11
SDHB-201ENST00000375499 TNFRSF10DQ9UBN6 386 aa14.34□□□□□ -0.11
SDHB-201ENST00000375499 SUCOQ9UBS9 1254 aaKnown RBP14.34□□□□□ -0.11
SDHB-201ENST00000375499 EXO1Q9UQ84 846 aaKnown RBP14.34□□□□□ -0.11
SDHB-201ENST00000375499 MEMO1Q9Y316 297 aa14.34□□□□□ -0.11
SDHB-201ENST00000375499 FIS1Q9Y3D6 152 aa14.34□□□□□ -0.11
SDHB-201ENST00000375499 TMEM233B4DJY2 109 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 ANXA4P09525 319 aaPredicted RBP14.33□□□□□ -0.12
SDHB-201ENST00000375499 RFPL3SP0C7P2 107 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 CAPN3P20807 821 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 IFFO1Q0D2I5 559 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 ZNF630Q2M218 657 aaPredicted RBP14.33□□□□□ -0.12
SDHB-201ENST00000375499 ZNF628Q5EBL2 1059 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 EMC4Q5J8M3 183 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 SPDYAQ5MJ70 313 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 SLC22A10Q63ZE4 541 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 RPTNQ6XPR3 784 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 BNC2Q6ZN30 1099 aaPredicted RBP14.33□□□□□ -0.12
SDHB-201ENST00000375499 ZCCHC23Q6ZST2 131 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 MRGPRGQ86SM5 289 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 CCDC116Q8IYX3 515 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 FBXW8Q8N3Y1 598 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 MARVELD2Q8N4S9 558 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 ZNF808Q8N4W9 903 aaPredicted RBP14.33□□□□□ -0.12
SDHB-201ENST00000375499 OR7G1Q8NGA0 311 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 OR52R1Q8NGF1 315 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 OR2T11Q8NH01 316 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 CDC26Q8NHZ8 85 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.33□□□□□ -0.123e-10■■□□□ 13.4
SDHB-201ENST00000375499 FAM57AQ8TBR7 257 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 KAT2AQ92830 837 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 ZBTB9Q96C00 473 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 DMRTA2Q96SC8 542 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 TUBB1Q9H4B7 451 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 ZNF703Q9H7S9 590 aaPredicted RBP14.33□□□□□ -0.12
SDHB-201ENST00000375499 IL1RL2Q9HB29 575 aa14.33□□□□□ -0.12
SDHB-201ENST00000375499 CCDC168Q8NDH2 2452 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 ESPNB1AK53 854 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 ACOT7O00154 380 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 TRIM13O60858 407 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 CRCPO75575 148 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 RSL1D1O76021 490 aaKnown RBP14.32□□□□□ -0.12
SDHB-201ENST00000375499 TPOP07202 933 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 UROSP10746 265 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 DRD2P14416 443 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 ENDOUP21128 410 aaKnown RBP14.32□□□□□ -0.12
SDHB-201ENST00000375499 PTGS2P35354 604 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 EMDP50402 254 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 CASP6P55212 293 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 NAA20P61599 178 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 ZNF763Q0D2J5 394 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 KIAA0040Q15053 153 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 RPS6KA2Q15349 733 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 CEBPEQ15744 281 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 IMPG1Q17R60 797 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 C6orf163Q5TEZ5 329 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 FAM71E1Q6IPT2 247 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 XKRXQ6PP77 449 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 SLC22A16Q86VW1 577 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 TAGAPQ8N103 731 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 FAM109AQ8N4B1 249 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 MREGQ8N565 214 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 ZNF675Q8TD23 568 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 TCP10LQ8TDR4 215 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 TP53INP1Q96A56 240 aa14.32□□□□□ -0.12
SDHB-201ENST00000375499 PFDN4Q9NQP4 134 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms