RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 FBXL12Q9NXK8 326 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 OBP2AQ9NY56 170 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 ZNF521Q96K83 1311 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 F5P12259 2224 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 OR6C70A6NIJ9 312 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 NUDT21O43809 227 aaKnown RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 MMP20O60882 483 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 RFPL3O75679 317 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 RGS9O75916 674 aaPredicted RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 ESR1P03372 595 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 GJB1P08034 283 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 GAAP10253 952 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 EGR1P18146 543 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 PRDX5P30044 214 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 SLC19A1P41440 591 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 SOX2P48431 317 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 GPLD1P80108 840 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 IRF9Q00978 393 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 LY6KQ17RY6 165 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 UGT3A2Q3SY77 523 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 SPANXN3Q5MJ09 141 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 SUSD4Q5VX71 490 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 B3GNTL1Q67FW5 361 aaPredicted RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 B3GLCTQ6Y288 498 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 TMEM135Q86UB9 458 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 ZDHHC17Q8IUH5 632 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 RBFAQ8N0V3 343 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 COMMD1Q8N668 190 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 OR4E2Q8NGC2 313 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 UBALD1Q8TB05 177 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 TMEM234Q8WY98 164 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 TFGQ92734 400 aaPredicted RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 TOMM40LQ969M1 308 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 ISG20Q96AZ6 181 aaKnown RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 MOCOSQ96EN8 888 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 COPS8Q99627 209 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 SLC35A5Q9BS91 424 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 PCBD2Q9H0N5 130 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 C11orf68Q9H3H3 251 aaKnown RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 SRA1Q9HD15 236 aaKnown RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 FAM86C1Q9NVL1 165 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 EXOGQ9Y2C4 368 aaKnown RBP4.45□□□□□ -1.7
SCN1A-202ENST00000375405 TESMINQ9Y4I5 508 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 ABCA1O95477 2261 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 ZNF407Q9C0G0 2248 aa4.45□□□□□ -1.7
SCN1A-202ENST00000375405 A0A1B0GVM2 712 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 TCAF2A6NFQ2 919 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 OOEPA6NGQ2 149 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 AQP7P3A6NL99 342 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 LRRC30A6NM36 301 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 E7ENQ6 273 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 MSCO60682 206 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 ACP5P13686 325 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 CYP3A5P20815 502 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 ENPP1P22413 925 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 PON1P27169 355 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 OR1D2P34982 312 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 CDKN2CP42773 168 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 PREPP48147 710 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 DGKGP49619 791 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 HK3P52790 923 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 EMP3P54852 163 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 WDR4P57081 412 aaKnown RBP4.44□□□□□ -1.7
SCN1A-202ENST00000375405 PDK3Q15120 406 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 BCL2L15Q5TBC7 163 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 AWAT2Q6E213 333 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 METAP1DQ6UB28 335 aaPredicted RBP4.44□□□□□ -1.7
SCN1A-202ENST00000375405 CERS6Q6ZMG9 384 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 GRAMD2AQ8IUY3 354 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 TOMM5Q8N4H5 51 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 FAM47BQ8NA70 645 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 TRMT61AQ96FX7 289 aaKnown RBP4.44□□□□□ -1.7
SCN1A-202ENST00000375405 PHOX2BQ99453 314 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 ELF4Q99607 663 aaPredicted RBP4.44□□□□□ -1.7
SCN1A-202ENST00000375405 ST6GALNAC5Q9BVH7 336 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 IL21RQ9HBE5 538 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 ZBTB20Q9HC78 741 aaPredicted RBP4.44□□□□□ -1.7
SCN1A-202ENST00000375405 TMEM8AQ9HCN3 771 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 SAGE1Q9NXZ1 904 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 NDUFA13Q9P0J0 144 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 PRODH2Q9UF12 536 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 ABCA10Q8WWZ4 1543 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 PIGBOS1A0A0B4J2F0 54 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 MYOCOSA0A1B0GUC4 107 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 SLC25A17O43808 307 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 ZNF217O75362 1048 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 DXOO77932 396 aaKnown RBP4.44□□□□□ -1.7
SCN1A-202ENST00000375405 PRNPP04156 253 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 ACRP10323 421 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 ITGAMP11215 1152 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 CARD18P57730 90 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 RAB11AP62491 216 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 GHRHRQ02643 423 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 MED27Q6P2C8 311 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 RBM44Q6ZP01 1051 aaKnown RBP4.44□□□□□ -1.7
SCN1A-202ENST00000375405 SFTPA2Q8IWL1 248 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 SFTPA1Q8IWL2 248 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 OR51T1Q8NGJ9 327 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 IL22RA2Q969J5 263 aa4.44□□□□□ -1.7
SCN1A-202ENST00000375405 ZDHHC15Q96MV8 337 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms