RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 KLHL3Q9UH77 587 aa11.55□□□□□ -0.56
UBR4-203ENST00000375225 NCKAP1Q9Y2A7 1128 aa11.55□□□□□ -0.56
UBR4-203ENST00000375225 IFT52Q9Y366 437 aa11.55□□□□□ -0.56
UBR4-203ENST00000375225 UGT2A1Q9Y4X1 527 aa11.55□□□□□ -0.56
UBR4-203ENST00000375225 PCDHGA3Q9Y5H0 932 aa11.55□□□□□ -0.56
UBR4-203ENST00000375225 PCYT1BQ9Y5K3 369 aaPredicted RBP11.55□□□□□ -0.56
UBR4-203ENST00000375225 ATG2BQ96BY7 2078 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 MYO10Q9HD67 2058 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 NUMA1Q14980 2115 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 A0A1W2PQF6 199 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 LOC110117498-PIK3R3F6TDL0 507 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 RNGTTO60942 597 aaKnown RBP11.54□□□□□ -0.56
UBR4-203ENST00000375225 ERAL1O75616 437 aaKnown RBP11.54□□□□□ -0.56
UBR4-203ENST00000375225 PAK4O96013 591 aaPredicted RBP11.54□□□□□ -0.56
UBR4-203ENST00000375225 HSMCR30P0CW71 290 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 ACADMP11310 421 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 BMP4P12644 408 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 IL9P15248 144 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 SMSP52788 366 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 DEFA1P59665 94 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 DEFA3P59666 94 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 RPS15AP62244 130 aaKnown RBP11.54□□□□□ -0.56
UBR4-203ENST00000375225 PRKCDQ05655 676 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 TARDBPQ13148 414 aaKnown RBP eCLIP11.54□□□□□ -0.56
UBR4-203ENST00000375225 CCINQ13939 588 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 GPAT3Q53EU6 434 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 KLHL22Q53GT1 634 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 DUS1LQ6P1R4 473 aaKnown RBP11.54□□□□□ -0.56
UBR4-203ENST00000375225 PGBD2Q6P3X8 592 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 ABHD17CQ6PCB6 329 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 NRROSQ86YC3 692 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 OR52E1Q8NGJ3 308 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 OR14C36Q8NHC7 312 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 VANGL1Q8TAA9 524 aaPredicted RBP11.54□□□□□ -0.56
UBR4-203ENST00000375225 GNPDA2Q8TDQ7 276 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 PIK3R3Q92569 461 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 MS4A6EQ96DS6 147 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 SIPA1Q96FS4 1042 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 CEP19Q96LK0 163 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 TRNT1Q96Q11 434 aaKnown RBP11.54□□□□□ -0.56
UBR4-203ENST00000375225 OR2M4Q96R27 311 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 MGLLQ99685 303 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 APOOQ9BUR5 198 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 NXF2Q9GZY0 626 aaKnown RBP11.54□□□□□ -0.56
UBR4-203ENST00000375225 FZD3Q9NPG1 666 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 PRDM9Q9NQV7 894 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 RHCGQ9UBD6 479 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 PHF11Q9UIL8 331 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 MMP17Q9ULZ9 603 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 KCNK6Q9Y257 313 aa11.54□□□□□ -0.56
UBR4-203ENST00000375225 LOC100506127A0A0U1RQW1 187 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 A0A1W2PQU0 124 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 AGAP5A6NIR3 686 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 MYL12BO14950 172 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 LCMT2O60294 686 aaKnown RBP11.53□□□□□ -0.56
UBR4-203ENST00000375225 LGI1O95970 557 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 ALPPP05187 535 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 CEACAM5P06731 702 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 DBTP11182 482 aaKnown RBP11.53□□□□□ -0.56
UBR4-203ENST00000375225 COL9A1P20849 921 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 ATP5A1P25705 553 aaKnown RBP11.53□□□□□ -0.56
UBR4-203ENST00000375225 BCL6P41182 706 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 BUD31P41223 144 aaPredicted RBP11.53□□□□□ -0.56
UBR4-203ENST00000375225 SLC15A1P46059 708 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 KIAA1024LP59773 190 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 RELAQ04206 551 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 SLC25A30Q5SVS4 291 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 MRM1Q6IN84 353 aaKnown RBP11.53□□□□□ -0.56
UBR4-203ENST00000375225 SLC48A1Q6P1K1 146 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 PLEKHG7Q6ZR37 379 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 USP30Q70CQ3 517 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 RRM2BQ7LG56 351 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 ACOT4Q8N9L9 421 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 TOR1AIP2Q8NFQ8 470 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 OR2L3Q8NG85 312 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 GAL3ST3Q96A11 431 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 FAM210AQ96ND0 272 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 SLC38A2Q96QD8 506 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 POLDIP3Q9BY77 421 aaKnown RBP11.53□□□□□ -0.56
UBR4-203ENST00000375225 C6orf62Q9GZU0 229 aaPredicted RBP11.53□□□□□ -0.56
UBR4-203ENST00000375225 MKRN2Q9H000 416 aaKnown RBP11.53□□□□□ -0.56
UBR4-203ENST00000375225 SLC25A19Q9HC21 320 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 ZBTB20Q9HC78 741 aaPredicted RBP11.53□□□□□ -0.56
UBR4-203ENST00000375225 CPNE5Q9HCH3 593 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 AMBNQ9NP70 447 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 C11orf16Q9NQ32 467 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 SELENONQ9NZV5 590 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 REV1Q9UBZ9 1251 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 NDRG2Q9UN36 371 aaKnown RBP11.53□□□□□ -0.56
UBR4-203ENST00000375225 ZFR2Q9UPR6 939 aaKnown RBP11.53□□□□□ -0.56
UBR4-203ENST00000375225 WDR37Q9Y2I8 494 aa11.53□□□□□ -0.56
UBR4-203ENST00000375225 MRPS17Q9Y2R5 130 aaKnown RBP11.53□□□□□ -0.56
UBR4-203ENST00000375225 SZT2Q5T011 3432 aa11.52□□□□□ -0.56
UBR4-203ENST00000375225 ISM1B1AKI9 464 aa11.52□□□□□ -0.57
UBR4-203ENST00000375225 FFAR1O14842 300 aa11.52□□□□□ -0.57
UBR4-203ENST00000375225 HAT1O14929 419 aa11.52□□□□□ -0.57
UBR4-203ENST00000375225 AXIN1O15169 862 aa11.52□□□□□ -0.57
UBR4-203ENST00000375225 UPK1BO75841 260 aa11.52□□□□□ -0.57
UBR4-203ENST00000375225 PTHP01270 115 aa11.52□□□□□ -0.57
UBR4-203ENST00000375225 SCG5P05408 212 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms