RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 TENM4Q6N022 2769 aa11.11□□□□□ -0.63
HDAC8-201ENST00000373554 SHANK1Q9Y566 2161 aa11.11□□□□□ -0.63
HDAC8-201ENST00000373554 PRRC2CQ9Y520 2896 aaKnown RBP11.1□□□□□ -0.63
HDAC8-201ENST00000373554 CAPN14A8MX76 684 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 MYO1GB0I1T2 1018 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 AKAP10O43572 662 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 PEX1O43933 1283 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 ZNF354AO60765 605 aaPredicted RBP11.1□□□□□ -0.63
HDAC8-201ENST00000373554 LRATO95237 230 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 NADKO95544 446 aaPredicted RBP11.1□□□□□ -0.63
HDAC8-201ENST00000373554 CBX7O95931 251 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 P04436 131 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 JUNP05412 331 aaKnown RBP11.1□□□□□ -0.63
HDAC8-201ENST00000373554 BCKDHAP12694 445 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 S1PR1P21453 382 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 GPX3P22352 226 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 HPCAL1P37235 193 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 RPL3P39023 403 aaKnown RBP11.1□□□□□ -0.63
HDAC8-201ENST00000373554 MEOX1P50221 254 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 TDGF1P3P51864 188 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 GPR85P60893 370 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 MAD2L1Q13257 205 aaPredicted RBP11.1□□□□□ -0.63
HDAC8-201ENST00000373554 TRMT12Q53H54 448 aaKnown RBP11.1□□□□□ -0.63
HDAC8-201ENST00000373554 C6orf136Q5SQH8 315 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 ATG16L1Q676U5 607 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 R3HCC1LQ7Z5L2 792 aaKnown RBP11.1□□□□□ -0.63
HDAC8-201ENST00000373554 SULF2Q8IWU5 870 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 LIX1Q8N485 282 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 CPSF7Q8N684 471 aaKnown RBP11.1□□□□□ -0.63
HDAC8-201ENST00000373554 ZNF441Q8N8Z8 693 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 FAM13CQ8NE31 585 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 CLHC1Q8NHS4 586 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 ZFP28Q8NHY6 868 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 RAB3IL1Q8TBN0 382 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 KAT2AQ92830 837 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 ARL8AQ96BM9 186 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 MTERF3Q96E29 417 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 C3orf30Q96M34 536 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 SORT1Q99523 831 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 C1orf50Q9BV19 199 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 ITPAQ9BY32 194 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 REEP4Q9H6H4 257 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 SACM1LQ9NTJ5 587 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 SEC14L3Q9UDX4 400 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 GIMAP2Q9UG22 337 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 BAIAP2L1Q9UHR4 511 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 HAO1Q9UJM8 370 aa11.1□□□□□ -0.63
HDAC8-201ENST00000373554 EXO1Q9UQ84 846 aaKnown RBP11.1□□□□□ -0.63
HDAC8-201ENST00000373554 EIF3LQ9Y262 564 aaKnown RBP11.1□□□□□ -0.63
HDAC8-201ENST00000373554 ACOT7O00154 380 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 TFECO14948 347 aaPredicted RBP11.09□□□□□ -0.63
HDAC8-201ENST00000373554 PDPK1O15530 556 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 PLOD3O60568 738 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 TBX19O60806 448 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 COQ9O75208 318 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 UNC5CO95185 931 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 FBXO45P0C2W1 286 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 PRPS2P11908 318 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 MST1P26927 711 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 DCAF7P61962 342 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 RPS6KA2Q15349 733 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 NNATQ16517 81 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 EIF2S3LQ2VIR3 472 aaKnown RBP11.09□□□□□ -0.63
HDAC8-201ENST00000373554 ZNF791Q3KP31 576 aaPredicted RBP11.09□□□□□ -0.63
HDAC8-201ENST00000373554 FHL5Q5TD97 284 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 IL23RQ5VWK5 629 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 GFRALQ6UXV0 394 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 GK5Q6ZS86 529 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 FAM47EQ6ZV65 393 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 PRR7Q8TB68 274 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 ADIPOR1Q96A54 375 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 ZBED6CLQ96FA7 236 aaPredicted RBP11.09□□□□□ -0.63
HDAC8-201ENST00000373554 PPP1R36Q96LQ0 422 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 AMDHD1Q96NU7 426 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 MANSC1Q9H8J5 431 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 DDX18Q9NVP1 670 aaKnown RBP11.09□□□□□ -0.63
HDAC8-201ENST00000373554 THAP1Q9NVV9 213 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 TAS2R9Q9NYW1 312 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 NOP53Q9NZM5 478 aaKnown RBP11.09□□□□□ -0.63
HDAC8-201ENST00000373554 SH3BP4Q9P0V3 963 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 DTX4Q9Y2E6 619 aa11.09□□□□□ -0.63
HDAC8-201ENST00000373554 RP1L1Q8IWN7 2480 aaPredicted RBP11.09□□□□□ -0.63
HDAC8-201ENST00000373554 A0A087WV62 115 aa11.08□□□□□ -0.64
HDAC8-201ENST00000373554 HMGB1P1B2RPK0 211 aaPredicted RBP11.08□□□□□ -0.64
HDAC8-201ENST00000373554 NPIPA5E9PKD4 350 aa11.08□□□□□ -0.64
HDAC8-201ENST00000373554 G3V3Y1 287 aa11.08□□□□□ -0.64
HDAC8-201ENST00000373554 TP53I11O14683 189 aa11.08□□□□□ -0.64
HDAC8-201ENST00000373554 SCAMP2O15127 329 aaKnown RBP11.08□□□□□ -0.64
HDAC8-201ENST00000373554 ACOX3O15254 700 aa11.08□□□□□ -0.64
HDAC8-201ENST00000373554 CCL3P10147 92 aa11.08□□□□□ -0.64
HDAC8-201ENST00000373554 SOX18P35713 384 aa11.08□□□□□ -0.64
HDAC8-201ENST00000373554 MC3RP41968 323 aa11.08□□□□□ -0.64
HDAC8-201ENST00000373554 EMDP50402 254 aa11.08□□□□□ -0.64
HDAC8-201ENST00000373554 KCNJ2P63252 427 aa11.08□□□□□ -0.64
HDAC8-201ENST00000373554 PLGLB1Q02325 96 aa11.08□□□□□ -0.64
HDAC8-201ENST00000373554 SRSF11Q05519 484 aaKnown RBP11.08□□□□□ -0.64
HDAC8-201ENST00000373554 RBPJQ06330 500 aa11.08□□□□□ -0.64
HDAC8-201ENST00000373554 PLCXD2Q0VAA5 305 aa11.08□□□□□ -0.64
HDAC8-201ENST00000373554 ZNF155Q12901 538 aaPredicted RBP11.08□□□□□ -0.64
HDAC8-201ENST00000373554 HSPB3Q12988 150 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms