RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 TBPL1P62380 186 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 PDE7AQ13946 482 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 MPP7Q5T2T1 576 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 FAM71E1Q6IPT2 247 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 PODNL1Q6PEZ8 512 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 GDPD4Q6W3E5 623 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 QSOX2Q6ZRP7 698 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 SZRD1Q7Z422 152 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 DNAJC5GQ8N7S2 189 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 ZNF366Q8N895 744 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 SPERTQ8NA61 448 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 CYB5D2Q8WUJ1 264 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 OTUB1Q96FW1 271 aaPredicted RBP14□□□□□ -0.17
COL9A2-202ENST00000372748 TMEM43Q9BTV4 400 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 HCFC1R1Q9NWW0 138 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 TAAR2Q9P1P5 351 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 PRELID1Q9Y255 219 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 GSTK1Q9Y2Q3 226 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 CKAP5Q14008 2032 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 A0A1B0GVC2 190 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 A6NIN4 97 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 GTPBP1O00178 669 aaKnown RBP14□□□□□ -0.17
COL9A2-202ENST00000372748 DVL2O14641 736 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 LRG1P02750 347 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 CXCL10P02778 98 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 EPHX1P07099 455 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 SDHBP21912 280 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 MMP11P24347 488 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 GIPRP48546 466 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 DEFB103AP81534 67 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 ZER1Q7Z7L7 766 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 METTL3Q86U44 580 aaKnown RBP14□□□□□ -0.17
COL9A2-202ENST00000372748 FAM26EQ8N5C1 309 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 UFD1Q92890 307 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 RNFT2Q96EX2 444 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 PDXPQ96GD0 296 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 LMLNQ96KR4 655 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 MARVELD1Q9BSK0 173 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 PLA2G12AQ9BZM1 189 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 SLAMF7Q9NQ25 335 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 DMRT3Q9NQL9 472 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 SATB2Q9UPW6 733 aa14□□□□□ -0.17
COL9A2-202ENST00000372748 ANHXE9PGG2 379 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 EVX1P49640 407 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 SLC7A9P82251 487 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 HSPB3Q12988 150 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 TECPR1Q7Z6L1 1165 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 IQCHQ86VS3 1027 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 SLC30A8Q8IWU4 369 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 C9orf62Q8N4C0 152 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 C2orf73Q8N5S3 287 aaPredicted RBP13.99□□□□□ -0.17
COL9A2-202ENST00000372748 OR2A12Q8NGT7 310 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 OR56A3Q8NH54 315 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 TMEM163Q8TC26 289 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 ZNF480Q8WV37 535 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 TTC9Q92623 222 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 AKAP1Q92667 903 aaKnown RBP eCLIP13.99□□□□□ -0.17
COL9A2-202ENST00000372748 ZC3HAV1LQ96H79 300 aaKnown RBP13.99□□□□□ -0.17
COL9A2-202ENST00000372748 ATF6BQ99941 703 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 EGLN3Q9H6Z9 239 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 ZSCAN32Q9NX65 697 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 MYO7AQ13402 2215 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 NPC1O15118 1278 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 GRM6O15303 877 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 HLA-DQB1P01920 261 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 CSTF1Q05048 431 aaKnown RBP13.99□□□□□ -0.17
COL9A2-202ENST00000372748 ZNF284Q2VY69 593 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 ARSIQ5FYB1 569 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 ANKRD54Q6NXT1 300 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 MED18Q9BUE0 208 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 POLDIP3Q9BY77 421 aaKnown RBP13.99□□□□□ -0.17
COL9A2-202ENST00000372748 CPEB1Q9BZB8 566 aaKnown RBP13.99□□□□□ -0.17
COL9A2-202ENST00000372748 HDHD2Q9H0R4 259 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 PPIL3Q9H2H8 161 aaKnown RBP13.99□□□□□ -0.17
COL9A2-202ENST00000372748 SEC14L3Q9UDX4 400 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 FBXW2Q9UKT8 454 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 PCDHGB7Q9Y5F8 929 aa13.99□□□□□ -0.17
COL9A2-202ENST00000372748 PIPSLA2A3N6 862 aa13.98□□□□□ -0.17
COL9A2-202ENST00000372748 RTCAO00442 366 aaKnown RBP13.98□□□□□ -0.17
COL9A2-202ENST00000372748 CCL16O15467 120 aa13.98□□□□□ -0.17
COL9A2-202ENST00000372748 LEFTY1O75610 366 aa13.98□□□□□ -0.17
COL9A2-202ENST00000372748 NPPBP16860 134 aa13.98□□□□□ -0.17
COL9A2-202ENST00000372748 CELP19835 753 aa13.98□□□□□ -0.17
COL9A2-202ENST00000372748 CCR2P41597 374 aa13.98□□□□□ -0.17
COL9A2-202ENST00000372748 GAS1P54826 345 aa13.98□□□□□ -0.17
COL9A2-202ENST00000372748 RAB8AP61006 207 aa13.98□□□□□ -0.17
COL9A2-202ENST00000372748 SPDYE7PQ495Y7 208 aa13.98□□□□□ -0.17
COL9A2-202ENST00000372748 RNLSQ5VYX0 342 aa13.98□□□□□ -0.17
COL9A2-202ENST00000372748 GLRX5Q86SX6 157 aa13.98□□□□□ -0.17
COL9A2-202ENST00000372748 FAM20CQ8IXL6 584 aa13.98□□□□□ -0.17
COL9A2-202ENST00000372748 OR8H3Q8N146 312 aa13.98□□□□□ -0.17
COL9A2-202ENST00000372748 OR4K5Q8NGD3 323 aa13.98□□□□□ -0.17
COL9A2-202ENST00000372748 DEFB118Q96PH6 123 aa13.98□□□□□ -0.17
COL9A2-202ENST00000372748 SOSTQ9BQB4 213 aa13.98□□□□□ -0.17
COL9A2-202ENST00000372748 SPG21Q9NZD8 308 aa13.98□□□□□ -0.17
COL9A2-202ENST00000372748 KCNN3Q9UGI6 736 aa13.98□□□□□ -0.17
COL9A2-202ENST00000372748 CD8B2A6NJW9 211 aa13.98□□□□□ -0.17
COL9A2-202ENST00000372748 TRIM3O75382 744 aaPredicted RBP13.98□□□□□ -0.17
COL9A2-202ENST00000372748 SLC43A1O75387 559 aa13.98□□□□□ -0.17
COL9A2-202ENST00000372748 PAHP00439 452 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms