RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 SAXO2Q658L1 398 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 ABHD17CQ6PCB6 329 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 PODNL1Q6PEZ8 512 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 IKBIPQ70UQ0 350 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 KRT73Q86Y46 540 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 CENPSQ8N2Z9 138 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 OR4C15Q8NGM1 316 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 RHOXF1Q8NHV9 184 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 UCK2Q9BZX2 261 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 EGLN3Q9H6Z9 239 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 WASH6PQ9NQA3 447 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 ZNF624Q9P2J8 865 aaPredicted RBP11.08□□□□□ -0.64
PDE6C-201ENST00000371447 NCKAP1Q9Y2A7 1128 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 CARD8Q9Y2G2 431 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 GPR55Q9Y2T6 319 aaPredicted RBP11.08□□□□□ -0.64
PDE6C-201ENST00000371447 WDFY4Q6ZS81 3184 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 SH3PXD2BA1X283 911 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 ZNF701M0R085 212 aaPredicted RBP11.08□□□□□ -0.64
PDE6C-201ENST00000371447 RGS5O15539 181 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 CNOT3O75175 753 aaKnown RBP11.08□□□□□ -0.64
PDE6C-201ENST00000371447 PCBP3P57721 371 aaKnown RBP11.08□□□□□ -0.64
PDE6C-201ENST00000371447 DMPKQ09013 629 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 MLIPQ5VWP3 458 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 TMEM92Q6UXU6 159 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 PRSS48Q7RTY5 328 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 ANKRD13BQ86YJ7 626 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 MYDGFQ969H8 173 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 MTERF3Q96E29 417 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 SH3YL1Q96HL8 342 aaPredicted RBP11.08□□□□□ -0.64
PDE6C-201ENST00000371447 ITPAQ9BY32 194 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 ZNF780BQ9Y6R6 833 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 C2orf16Q68DN1 1984 aa11.08□□□□□ -0.64
PDE6C-201ENST00000371447 TLR4O00206 839 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 CPN2P22792 545 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 PKLRP30613 574 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 TGM4P49221 684 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 UGT2B15P54855 530 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 PCBP4P57723 403 aaKnown RBP11.07□□□□□ -0.64
PDE6C-201ENST00000371447 TAS2R41P59536 307 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 NNATQ16517 81 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 DGUOKQ16854 277 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 ZNF311Q5JNZ3 666 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 IQCF2Q8IXL9 164 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 METTL27Q8N6F8 245 aaPredicted RBP11.07□□□□□ -0.64
PDE6C-201ENST00000371447 SLC16A11Q8NCK7 471 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 NUP43Q8NFH3 380 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 MRGPRX1Q96LB2 322 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 DACH2Q96NX9 599 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 GPN2Q9H9Y4 310 aaPredicted RBP11.07□□□□□ -0.64
PDE6C-201ENST00000371447 PSORS1C1Q9UIG5 152 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 CAB39Q9Y376 341 aaPredicted RBP11.07□□□□□ -0.64
PDE6C-201ENST00000371447 MRPS2Q9Y399 296 aaKnown RBP11.07□□□□□ -0.64
PDE6C-201ENST00000371447 KIF26AQ9ULI4 1882 aaPredicted RBP11.07□□□□□ -0.64
PDE6C-201ENST00000371447 MAN2B1O00754 1011 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 GNB5O14775 395 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 NDUFV2P19404 249 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 CSNK2A2P19784 350 aaPredicted RBP11.07□□□□□ -0.64
PDE6C-201ENST00000371447 ELAVL4P26378 380 aaKnown RBP11.07□□□□□ -0.64
PDE6C-201ENST00000371447 C10orf62Q5T681 223 aaPredicted RBP11.07□□□□□ -0.64
PDE6C-201ENST00000371447 FAM92BQ6ZTR7 304 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 ZFP41Q8N8Y5 198 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 OR4K5Q8NGD3 323 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 SPATA9Q9BWV2 254 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 C1QTNF7Q9BXJ2 289 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 TPSD1Q9BZJ3 242 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 DDX31Q9H8H2 851 aaKnown RBP11.07□□□□□ -0.64
PDE6C-201ENST00000371447 PRDM7Q9NQW5 492 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 GIMAP4Q9NUV9 329 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 CLN6Q9NWW5 311 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 TOR4AQ9NXH8 423 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 KLHL3Q9UH77 587 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 COLEC10Q9Y6Z7 277 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 MDC1Q14676 2089 aaKnown RBP11.07□□□□□ -0.64
PDE6C-201ENST00000371447 A0A0A6YYD5 115 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 CLDN25C9JDP6 229 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 M0R082 166 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 CTSVO60911 334 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 CLEC3AO75596 197 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 CD300CQ08708 224 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 SLC13A2Q13183 592 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 E2F2Q14209 437 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 CCDC85BQ15834 202 aaPredicted RBP11.07□□□□□ -0.64
PDE6C-201ENST00000371447 Q6ZS52 159 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 OR2L8Q8NGY9 312 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 ADAMTS15Q8TE58 950 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 HTRA1Q92743 480 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 GPA33Q99795 319 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 CNPPD1Q9BV87 410 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 TRNAU1APQ9NX07 287 aaKnown RBP11.07□□□□□ -0.64
PDE6C-201ENST00000371447 CLEC1BQ9P126 229 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 CYP8B1Q9UNU6 501 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 PMF1-BGLAPU3KQ54 211 aa11.07□□□□□ -0.64
PDE6C-201ENST00000371447 OR2A25A4D2G3 310 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 NDUFB5O43674 189 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 DNAJB5O75953 348 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 SEMA3DO95025 777 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 CTSBP07858 339 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 ADORA3P0DMS8 318 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 JUNDP17535 347 aa11.06□□□□□ -0.64
PDE6C-201ENST00000371447 HSD17B2P37059 387 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms