RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 CTHRC1Q96CG8 243 aa13.74□□□□□ -0.21
COL9A1-204ENST00000370496 MAGED4Q96JG8 741 aa13.74□□□□□ -0.21
COL9A1-204ENST00000370496 MAELQ96JY0 434 aaKnown RBP13.74□□□□□ -0.21
COL9A1-204ENST00000370496 MARK4Q96L34 752 aa13.74□□□□□ -0.21
COL9A1-204ENST00000370496 SIGLEC12Q96PQ1 595 aa13.74□□□□□ -0.21
COL9A1-204ENST00000370496 OR52B2Q96RD2 323 aa13.74□□□□□ -0.21
COL9A1-204ENST00000370496 AIG1Q9NVV5 245 aa13.74□□□□□ -0.21
COL9A1-204ENST00000370496 HPF1Q9NWY4 346 aa13.74□□□□□ -0.21
COL9A1-204ENST00000370496 PRODH2Q9UF12 536 aa13.74□□□□□ -0.21
COL9A1-204ENST00000370496 PCDHGA10Q9Y5H3 936 aa13.74□□□□□ -0.21
COL9A1-204ENST00000370496 TTLL8A6PVC2 850 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 CDK2AP1O14519 115 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 ZNF195O14628 629 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 SUV39H1O43463 412 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 EDF1O60869 148 aaKnown RBP13.73□□□□□ -0.21
COL9A1-204ENST00000370496 SLC25A12O75746 678 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 OR6B1O95007 311 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 TGDSO95455 350 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 CD46P15529 392 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 EFNA1P20827 205 aaPredicted RBP13.73□□□□□ -0.21
COL9A1-204ENST00000370496 S1PR1P21453 382 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 GPX3P22352 226 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 SOX3P41225 446 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 CLNS1AP54105 237 aaKnown RBP13.73□□□□□ -0.21
COL9A1-204ENST00000370496 AQP5P55064 265 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 NME5P56597 212 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 CLDN8P56748 225 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 NRG3P56975 720 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 C21orf58P58505 322 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 GUCY1A3Q02108 690 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 DUSP8Q13202 625 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 RPS6KA2Q15349 733 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 NNATQ16517 81 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 MPEG1Q2M385 716 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 PGS1Q32NB8 556 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 PLEKHN1Q494U1 663 aaPredicted RBP13.73□□□□□ -0.21
COL9A1-204ENST00000370496 ZNF766Q5HY98 468 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 ZNF468Q5VIY5 522 aaPredicted RBP13.73□□□□□ -0.21
COL9A1-204ENST00000370496 OPN5Q6U736 354 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 ZNF551Q7Z340 670 aaPredicted RBP13.73□□□□□ -0.21
COL9A1-204ENST00000370496 RIMKLAQ8IXN7 391 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 GPALPP1Q8IXQ4 340 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 Q8NA96 180 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 MDS2Q8NDY4 140 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 SIMC1Q8NDZ2 872 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 CEP70Q8NHQ1 597 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 DUSP26Q9BV47 211 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 ITPAQ9BY32 194 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 BHLHE41Q9C0J9 482 aaPredicted RBP13.73□□□□□ -0.21
COL9A1-204ENST00000370496 EPN3Q9H201 632 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 ANKRA2Q9H9E1 313 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 TCF7L2Q9NQB0 619 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 KLHL1Q9NR64 748 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 ACSS1Q9NUB1 689 aaPredicted RBP13.73□□□□□ -0.21
COL9A1-204ENST00000370496 ZNF639Q9UID6 485 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 DTX4Q9Y2E6 619 aa13.73□□□□□ -0.21
COL9A1-204ENST00000370496 A0A087WV62 115 aa13.72□□□□□ -0.21
COL9A1-204ENST00000370496 E9PBE3 544 aa13.72□□□□□ -0.21
COL9A1-204ENST00000370496 UBDO15205 165 aa13.72□□□□□ -0.21
COL9A1-204ENST00000370496 PLOD3O60568 738 aa13.72□□□□□ -0.21
COL9A1-204ENST00000370496 LAMP1P11279 417 aa13.72□□□□□ -0.21
COL9A1-204ENST00000370496 IDO1P14902 403 aa13.72□□□□□ -0.21
COL9A1-204ENST00000370496 FRKP42685 505 aaPredicted RBP13.72□□□□□ -0.21
COL9A1-204ENST00000370496 NR0B1P51843 470 aaKnown RBP13.72□□□□□ -0.21
COL9A1-204ENST00000370496 DPY19L1Q2PZI1 675 aa13.72□□□□□ -0.21
COL9A1-204ENST00000370496 LSM12Q3MHD2 195 aaKnown RBP13.72□□□□□ -0.21
COL9A1-204ENST00000370496 TMEM198Q66K66 360 aa13.72□□□□□ -0.21
COL9A1-204ENST00000370496 SPINK14Q6IE38 97 aa13.72□□□□□ -0.21
COL9A1-204ENST00000370496 EPGNQ6UW88 154 aa13.72□□□□□ -0.21
COL9A1-204ENST00000370496 NATD1Q8N6N6 113 aa13.72□□□□□ -0.21
COL9A1-204ENST00000370496 TMEM178AQ8NBL3 297 aa13.72□□□□□ -0.21
COL9A1-204ENST00000370496 THOC1Q96FV9 657 aaKnown RBP13.72□□□□□ -0.21
COL9A1-204ENST00000370496 ZBTB18Q99592 522 aa13.72□□□□□ -0.21
COL9A1-204ENST00000370496 NEUROD4Q9HD90 331 aa13.72□□□□□ -0.21
COL9A1-204ENST00000370496 NPHS2Q9NP85 383 aa13.72□□□□□ -0.21
COL9A1-204ENST00000370496 TAS2R9Q9NYW1 312 aa13.72□□□□□ -0.21
COL9A1-204ENST00000370496 A0A1W2PRB8 838 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 CFLARO15519 480 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 NEURL1O76050 574 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 SOX18P35713 384 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 KIR3DL1P43629 444 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 TMED10P49755 219 aaKnown RBP13.71□□□□□ -0.21
COL9A1-204ENST00000370496 EMDP50402 254 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 CDK9P50750 372 aaKnown RBP13.71□□□□□ -0.21
COL9A1-204ENST00000370496 STX1BP61266 288 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 INAQ16352 499 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 PRR30Q53SZ7 412 aaPredicted RBP13.71□□□□□ -0.21
COL9A1-204ENST00000370496 PIGGQ5H8A4 983 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 FHL5Q5TD97 284 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 FAM180AQ6UWF9 173 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 IL20RBQ6UXL0 311 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 CAMKMTQ7Z624 323 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 CNTRLQ7Z7A1 2325 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 OR2L13Q8N349 312 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 SLC15A4Q8N697 577 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 ZNF441Q8N8Z8 693 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 C17orf47Q8NEP4 570 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 EXPH5Q8NEV8 1989 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 NUDT8Q8WV74 236 aa13.71□□□□□ -0.21
COL9A1-204ENST00000370496 ELP4Q96EB1 424 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms