RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 PRAMEF27A3QJZ7 478 aa22.32■■□□□ 1.16
SNX3-203ENST00000368979 CASQ2O14958 399 aaPredicted RBP22.32■■□□□ 1.16
SNX3-203ENST00000368979 POLR1CO15160 346 aaPredicted RBP22.32■■□□□ 1.16
SNX3-203ENST00000368979 HNRNPRO43390 633 aaKnown RBP22.32■■□□□ 1.16
SNX3-203ENST00000368979 TIPRLO75663 272 aa22.32■■□□□ 1.16
SNX3-203ENST00000368979 BCHEP06276 602 aa22.32■■□□□ 1.16
SNX3-203ENST00000368979 ATXN8OSP0DMR3 200 aa22.32■■□□□ 1.16
SNX3-203ENST00000368979 GALNSP34059 522 aa22.32■■□□□ 1.16
SNX3-203ENST00000368979 INSM1Q01101 510 aaPredicted RBP22.32■■□□□ 1.16
SNX3-203ENST00000368979 FAM98BQ52LJ0 330 aaKnown RBP22.32■■□□□ 1.16
SNX3-203ENST00000368979 EXOSC6Q5RKV6 272 aaKnown RBP22.32■■□□□ 1.16
SNX3-203ENST00000368979 EIF3MQ7L2H7 374 aaKnown RBP22.32■■□□□ 1.16
SNX3-203ENST00000368979 ERMP1Q7Z2K6 904 aa22.32■■□□□ 1.16
SNX3-203ENST00000368979 PIP4P1Q86T03 277 aa22.32■■□□□ 1.16
SNX3-203ENST00000368979 GALNT12Q8IXK2 581 aa22.32■■□□□ 1.16
SNX3-203ENST00000368979 VWA5B2Q8N398 1253 aa22.32■■□□□ 1.16
SNX3-203ENST00000368979 METTL25Q8N6Q8 603 aa22.32■■□□□ 1.16
SNX3-203ENST00000368979 TMEM102Q8N9M5 508 aaPredicted RBP22.32■■□□□ 1.16
SNX3-203ENST00000368979 DOK4Q8TEW6 326 aa22.32■■□□□ 1.16
SNX3-203ENST00000368979 LRTOMTQ8WZ04 291 aa22.32■■□□□ 1.16
SNX3-203ENST00000368979 CLIP3Q96DZ5 547 aa22.32■■□□□ 1.16
SNX3-203ENST00000368979 RNF31Q96EP0 1072 aa22.32■■□□□ 1.16
SNX3-203ENST00000368979 TMEM19Q96HH6 336 aa22.32■■□□□ 1.16
SNX3-203ENST00000368979 DGAT2Q96PD7 388 aa22.32■■□□□ 1.16
SNX3-203ENST00000368979 OR7D2Q96RA2 312 aa22.32■■□□□ 1.16
SNX3-203ENST00000368979 CTRCQ99895 268 aa22.32■■□□□ 1.16
SNX3-203ENST00000368979 PELOQ9BRX2 385 aaKnown RBP22.32■■□□□ 1.16
SNX3-203ENST00000368979 MAGIXQ9H6Y5 334 aa22.32■■□□□ 1.16
SNX3-203ENST00000368979 EQTNQ9NQ60 294 aa22.32■■□□□ 1.16
SNX3-203ENST00000368979 FER1L5A0AVI2 2057 aa22.32■■□□□ 1.16
SNX3-203ENST00000368979 IGLV3-12A0A075B6K2 115 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 GDF9O60383 454 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 RAP2AP10114 183 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 CCL4P13236 92 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 AQP1P29972 269 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 RORAP35398 523 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 RHAGQ02094 409 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 VWA2Q5GFL6 755 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 CRB2Q5IJ48 1285 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 CDCP2Q5VXM1 449 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 REEP3Q6NUK4 255 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 CDC73Q6P1J9 531 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 SLC47A1Q96FL8 570 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 RBM18Q96H35 190 aaKnown RBP22.31■■□□□ 1.16
SNX3-203ENST00000368979 PYURFQ96I23 114 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 RNF145Q96MT1 663 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 PTCHD1Q96NR3 888 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 TGIF2Q9GZN2 237 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 TOR4AQ9NXH8 423 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 ZNF451Q9Y4E5 1061 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 PCDHGA1Q9Y5H4 931 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 B4E171 279 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 CBX7O95931 251 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 S1PR1P21453 382 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 TSPAN7P41732 249 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 EFNA3P52797 238 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 CHRNB3Q05901 458 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 FUT5Q11128 374 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 ELOAQ14241 798 aaKnown RBP22.31■■□□□ 1.16
SNX3-203ENST00000368979 NKAIN1Q4KMZ8 207 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 HMBOX1Q6NT76 420 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 XAGE5Q8WWM1 108 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 RIT1Q92963 219 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 OTUB1Q96FW1 271 aaPredicted RBP22.31■■□□□ 1.16
SNX3-203ENST00000368979 CHID1Q9BWS9 393 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 CTSFQ9UBX1 484 aa22.31■■□□□ 1.16
SNX3-203ENST00000368979 C5orf58C9J3I9 102 aa22.3■■□□□ 1.16
SNX3-203ENST00000368979 FOXD2O60548 495 aaPredicted RBP22.3■■□□□ 1.16
SNX3-203ENST00000368979 NME6O75414 186 aaPredicted RBP22.3■■□□□ 1.16
SNX3-203ENST00000368979 ZNF682O95780 498 aa22.3■■□□□ 1.16
SNX3-203ENST00000368979 FCGR1AP12314 374 aa22.3■■□□□ 1.16
SNX3-203ENST00000368979 CLCN2P51788 898 aa22.3■■□□□ 1.16
SNX3-203ENST00000368979 DCDP81605 110 aaKnown RBP22.3■■□□□ 1.16
SNX3-203ENST00000368979 EXOSC7Q15024 291 aaKnown RBP22.3■■□□□ 1.16
SNX3-203ENST00000368979 SYPL1Q16563 259 aa22.3■■□□□ 1.16
SNX3-203ENST00000368979 CCDC157Q569K6 752 aa22.3■■□□□ 1.16
SNX3-203ENST00000368979 C7orf57Q8NEG2 295 aa22.3■■□□□ 1.16
SNX3-203ENST00000368979 CMKLR1Q99788 373 aa22.3■■□□□ 1.16
SNX3-203ENST00000368979 ADAP2Q9NPF8 381 aa22.3■■□□□ 1.16
SNX3-203ENST00000368979 KCNE3Q9Y6H6 103 aa22.3■■□□□ 1.16
SNX3-203ENST00000368979 MUC6Q6W4X9 2439 aa22.29■■□□□ 1.16
SNX3-203ENST00000368979 TMEM247A6NEH6 219 aa22.29■■□□□ 1.16
SNX3-203ENST00000368979 TMEM229AB2RXF0 380 aa22.29■■□□□ 1.16
SNX3-203ENST00000368979 TPST1O60507 370 aa22.29■■□□□ 1.16
SNX3-203ENST00000368979 CPNE3O75131 537 aaKnown RBP22.29■■□□□ 1.16
SNX3-203ENST00000368979 PGM3O95394 542 aa22.29■■□□□ 1.16
SNX3-203ENST00000368979 HOXB6P17509 224 aaKnown RBP22.29■■□□□ 1.16
SNX3-203ENST00000368979 DUSP8Q13202 625 aa22.29■■□□□ 1.16
SNX3-203ENST00000368979 MINDY4Q4G0A6 757 aa22.29■■□□□ 1.16
SNX3-203ENST00000368979 CYBRD1Q53TN4 286 aa22.29■■□□□ 1.16
SNX3-203ENST00000368979 RPS26P11Q5JNZ5 115 aaPredicted RBP22.29■■□□□ 1.16
SNX3-203ENST00000368979 MFSD4BQ5TF39 518 aa22.29■■□□□ 1.16
SNX3-203ENST00000368979 STPG1Q5TH74 334 aa22.29■■□□□ 1.16
SNX3-203ENST00000368979 ZCCHC12Q6PEW1 402 aa22.29■■□□□ 1.16
SNX3-203ENST00000368979 PATL1Q86TB9 770 aaKnown RBP22.29■■□□□ 1.16
SNX3-203ENST00000368979 TSLPQ969D9 159 aa22.29■■□□□ 1.16
SNX3-203ENST00000368979 TAMM41Q96BW9 452 aa22.29■■□□□ 1.16
SNX3-203ENST00000368979 AGPAT4Q9NRZ5 378 aa22.29■■□□□ 1.16
SNX3-203ENST00000368979 ADPRHL2Q9NX46 363 aa22.29■■□□□ 1.16
SNX3-203ENST00000368979 AKAP7Q9P0M2 348 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms