RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 CEACAM8P31997 349 aaPredicted RBP9.46□□□□□ -0.9
CLRN3-201ENST00000368671 TIMP3P35625 211 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 CASP3P42574 277 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 TMED10P49755 219 aaKnown RBP9.46□□□□□ -0.9
CLRN3-201ENST00000368671 CDK9P50750 372 aaKnown RBP9.46□□□□□ -0.9
CLRN3-201ENST00000368671 ZNF136P52737 540 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 DGKQP52824 942 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 NRG3P56975 720 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 RPP38P78345 283 aaKnown RBP9.46□□□□□ -0.9
CLRN3-201ENST00000368671 CAV1Q03135 178 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 FOXD4Q12950 439 aaPredicted RBP9.46□□□□□ -0.9
CLRN3-201ENST00000368671 NAB1Q13506 487 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 ACAP2Q15057 778 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 PCBP2Q15366 365 aaKnown RBP eCLIP9.46□□□□□ -0.9
CLRN3-201ENST00000368671 TRADDQ15628 312 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 NNATQ16517 81 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 EIPR1Q53HC9 387 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 WIPI1Q5MNZ9 446 aaPredicted RBP9.46□□□□□ -0.9
CLRN3-201ENST00000368671 TTC19Q6DKK2 380 aaPredicted RBP9.46□□□□□ -0.9
CLRN3-201ENST00000368671 ZDHHC24Q6UX98 284 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 PM20D2Q8IYS1 436 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 OR4K14Q8NGD5 310 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 FBXO25Q8TCJ0 367 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 FAM222BQ8WU58 562 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 ATP6V1E2Q96A05 226 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 GNRHR2Q96P88 292 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 SERPINI1Q99574 410 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 UGT2B28Q9BY64 529 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 ANGPTL4Q9BY76 406 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 PRDM14Q9GZV8 571 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 RAB17Q9H0T7 212 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 OR10A5Q9H207 317 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 VPS11Q9H270 941 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 NOL11Q9H8H0 719 aaKnown RBP9.46□□□□□ -0.9
CLRN3-201ENST00000368671 CXorf21Q9HAI6 301 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 PYCARDQ9ULZ3 195 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 EDARQ9UNE0 448 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 C15orf41Q9Y2V0 281 aa9.46□□□□□ -0.9
CLRN3-201ENST00000368671 TACC2O95359 2948 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 TUBAL3A6NHL2 446 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 EEF1E1-BLOC1S5C9J1V9 151 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 FOXE1O00358 373 aaPredicted RBP9.45□□□□□ -0.9
CLRN3-201ENST00000368671 OR7A17O14581 309 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 EEF1E1O43324 174 aaKnown RBP9.45□□□□□ -0.9
CLRN3-201ENST00000368671 KLHL2O95198 593 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 CLDN9O95484 217 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 KLK1P06870 262 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 BMP7P18075 431 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 XKP51811 444 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 FUT7Q11130 342 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 SF3B4Q15427 424 aaKnown RBP eCLIP9.45□□□□□ -0.9
CLRN3-201ENST00000368671 KRTAP21-3Q3LHN1 58 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 FBXL19-AS1Q494R0 122 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 DCST1Q5T197 706 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 FNDC7Q5VTL7 733 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 NSUN5P2Q63ZY6 315 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 VASNQ6EMK4 673 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 KLC3Q6P597 504 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 POMZP3Q6PJE2 187 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 ANGPTL8Q6UXH0 198 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 YRDCQ86U90 279 aaKnown RBP9.45□□□□□ -0.9
CLRN3-201ENST00000368671 ZNF615Q8N8J6 731 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 PTGR2Q8N8N7 351 aaPredicted RBP9.45□□□□□ -0.9
CLRN3-201ENST00000368671 L3MBTL4Q8NA19 623 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 OR52B6Q8NGF0 335 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 LINC01560Q8TB33 94 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 ADIPOR1Q96A54 375 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 WDYHV1Q96HA8 205 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 TMEM41AQ96HV5 264 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 SECISBP2Q96T21 854 aaKnown RBP9.45□□□□□ -0.9
CLRN3-201ENST00000368671 BRINP2Q9C0B6 783 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 NXF5Q9H1B4 397 aaKnown RBP9.45□□□□□ -0.9
CLRN3-201ENST00000368671 UBQLN3Q9H347 655 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 GSX1Q9H4S2 264 aaPredicted RBP9.45□□□□□ -0.9
CLRN3-201ENST00000368671 METTL7AQ9H8H3 244 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 PSD3Q9NYI0 1048 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 ZNF629Q9UEG4 869 aaPredicted RBP9.45□□□□□ -0.9
CLRN3-201ENST00000368671 BCAP29Q9UHQ4 241 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 FOXD3Q9UJU5 478 aaPredicted RBP9.45□□□□□ -0.9
CLRN3-201ENST00000368671 TNPO3Q9Y5L0 923 aaKnown RBP9.45□□□□□ -0.9
CLRN3-201ENST00000368671 IKBKGQ9Y6K9 419 aa9.45□□□□□ -0.9
CLRN3-201ENST00000368671 NINQ8N4C6 2090 aa9.44□□□□□ -0.9
CLRN3-201ENST00000368671 FREM3P0C091 2139 aa9.44□□□□□ -0.9
CLRN3-201ENST00000368671 HMX2A2RU54 273 aa9.44□□□□□ -0.9
CLRN3-201ENST00000368671 MBD3L4A6NDZ8 208 aaPredicted RBP9.44□□□□□ -0.9
CLRN3-201ENST00000368671 MBD3L3A6NE82 208 aaPredicted RBP9.44□□□□□ -0.9
CLRN3-201ENST00000368671 MBD3L5A6NJ08 208 aaPredicted RBP9.44□□□□□ -0.9
CLRN3-201ENST00000368671 SEMA3DO95025 777 aa9.44□□□□□ -0.9
CLRN3-201ENST00000368671 RAF1P04049 648 aa9.44□□□□□ -0.9
CLRN3-201ENST00000368671 CPMP14384 443 aa9.44□□□□□ -0.9
CLRN3-201ENST00000368671 PORP16435 677 aaPredicted RBP9.44□□□□□ -0.9
CLRN3-201ENST00000368671 GPX3P22352 226 aa9.44□□□□□ -0.9
CLRN3-201ENST00000368671 CTSSP25774 331 aa9.44□□□□□ -0.9
CLRN3-201ENST00000368671 ABCD3P28288 659 aa9.44□□□□□ -0.9
CLRN3-201ENST00000368671 PTPN6P29350 595 aa9.44□□□□□ -0.9
CLRN3-201ENST00000368671 TYK2P29597 1187 aa9.44□□□□□ -0.9
CLRN3-201ENST00000368671 SERPINB8P50452 374 aa9.44□□□□□ -0.9
CLRN3-201ENST00000368671 CCNG1P51959 295 aa9.44□□□□□ -0.9
CLRN3-201ENST00000368671 RCAN2Q14206 197 aa9.44□□□□□ -0.9
CLRN3-201ENST00000368671 SGO1Q5FBB7 561 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms