RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 FLYWCH1Q4VC44 716 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 CCNYL2Q5T2Q4 361 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 NSUN5P2Q63ZY6 315 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 TIGD3Q6B0B8 471 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 TTC19Q6DKK2 380 aaPredicted RBP14.64□□□□□ -0.07
CKS1B-202ENST00000368436 SLC48A1Q6P1K1 146 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 TMEM81Q6P7N7 255 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 PRR22Q8IZ63 422 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 OR4F6Q8NGB9 312 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 FAM222BQ8WU58 562 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 SLC44A1Q8WWI5 657 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 LRRC46Q96FV0 321 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 WDYHV1Q96HA8 205 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 NSUN5Q96P11 429 aaKnown RBP14.64□□□□□ -0.07
CKS1B-202ENST00000368436 GPATCH1Q9BRR8 931 aaKnown RBP14.64□□□□□ -0.07
CKS1B-202ENST00000368436 LRRC1Q9BTT6 524 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 NXF5Q9H1B4 397 aaKnown RBP14.64□□□□□ -0.07
CKS1B-202ENST00000368436 CLEC4MQ9H2X3 399 aaPredicted RBP14.64□□□□□ -0.07
CKS1B-202ENST00000368436 LIME1Q9H400 295 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 CCM2LQ9NUG4 571 aaPredicted RBP14.64□□□□□ -0.07
CKS1B-202ENST00000368436 ZNF639Q9UID6 485 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 ST6GALNAC2Q9UJ37 374 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 FOXD3Q9UJU5 478 aaPredicted RBP14.64□□□□□ -0.07
CKS1B-202ENST00000368436 DTX4Q9Y2E6 619 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 SLC6A5Q9Y345 797 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 ZFHX3Q15911 3703 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 MTORP42345 2549 aa14.64□□□□□ -0.07
CKS1B-202ENST00000368436 PRRC2AP48634 2157 aaKnown RBP14.64□□□□□ -0.07
CKS1B-202ENST00000368436 A0A1B0GTL3 188 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 C1orf226A1L170 272 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 GUCY1B2O75343 617 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 PPM1BO75688 479 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 IL2RAP01589 272 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 ATP1B1P05026 303 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 COL6A2P12110 1019 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 PTPN6P29350 595 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 SOX18P35713 384 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 MASP1P48740 699 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 MAPK12P53778 367 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 IFT88Q13099 833 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 DAZAP2Q15038 168 aaPredicted RBP14.63□□□□□ -0.07
CKS1B-202ENST00000368436 TSNAXIP1Q2TAA8 658 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 EIPR1Q53HC9 387 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 C6orf163Q5TEZ5 329 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 NUP54Q7Z3B4 507 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 MILR1Q7Z6M3 343 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 VWA5B2Q8N398 1253 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 HGDQ93099 445 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 HSPBAP1Q96EW2 488 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 UGT2B28Q9BY64 529 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 MAT2BQ9NZL9 334 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 XPR1Q9UBH6 696 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 MTRF1LQ9UGC7 380 aaKnown RBP14.63□□□□□ -0.07
CKS1B-202ENST00000368436 CFL2Q9Y281 166 aa14.63□□□□□ -0.07
CKS1B-202ENST00000368436 NF1P21359 2839 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 MBD3L4A6NDZ8 208 aaPredicted RBP14.62□□□□□ -0.07
CKS1B-202ENST00000368436 MBD3L3A6NE82 208 aaPredicted RBP14.62□□□□□ -0.07
CKS1B-202ENST00000368436 GOLGA6L10A6NI86 522 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 MBD3L5A6NJ08 208 aaPredicted RBP14.62□□□□□ -0.07
CKS1B-202ENST00000368436 A6NNC1 897 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 SMIM24O75264 130 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 RPS17P08708 135 aaKnown RBP14.62□□□□□ -0.07
CKS1B-202ENST00000368436 CD99P14209 185 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 KRT15P19012 456 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 CSNK2A2P19784 350 aaPredicted RBP14.62□□□□□ -0.07
CKS1B-202ENST00000368436 PTGDSP41222 190 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 SERPINB9P50453 376 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 NAGLUP54802 743 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 GALNT1Q10472 559 aaPredicted RBP14.62□□□□□ -0.07
CKS1B-202ENST00000368436 AKAP6Q13023 2319 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 KRTAP21-3Q3LHN1 58 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 SGO1Q5FBB7 561 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 WIPI1Q5MNZ9 446 aaPredicted RBP14.62□□□□□ -0.07
CKS1B-202ENST00000368436 DCST1Q5T197 706 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 C8orf74Q6P047 294 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 FAM111BQ6SJ93 734 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 COMMD6Q7Z4G1 85 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 CDC20BQ86Y33 519 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 TGIF2LYQ8IUE0 185 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 C17orf53Q8N3J3 647 aaPredicted RBP14.62□□□□□ -0.07
CKS1B-202ENST00000368436 OR1J4Q8NGS1 313 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 MBD3L2Q8NHZ7 208 aaPredicted RBP14.62□□□□□ -0.07
CKS1B-202ENST00000368436 ABTB1Q969K4 478 aaPredicted RBP14.62□□□□□ -0.07
CKS1B-202ENST00000368436 TM4SF18Q96CE8 201 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 CTHRC1Q96CG8 243 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 C1QTNF3Q9BXJ4 246 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 EPB41L4BQ9H329 900 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 ELOVL6Q9H5J4 265 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 CALHM2Q9HA72 323 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 BRF2Q9HAW0 419 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 FARSBQ9NSD9 589 aaKnown RBP14.62□□□□□ -0.07
CKS1B-202ENST00000368436 CBLCQ9ULV8 474 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 SLC12A4Q9UP95 1085 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 CAMK2AQ9UQM7 478 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 MPDZO75970 2070 aa14.62□□□□□ -0.07
CKS1B-202ENST00000368436 PPP6CO00743 305 aa14.61□□□□□ -0.07
CKS1B-202ENST00000368436 GNB5O14775 395 aa14.61□□□□□ -0.07
CKS1B-202ENST00000368436 ACOX3O15254 700 aa14.61□□□□□ -0.07
CKS1B-202ENST00000368436 ACTL6AO96019 429 aa14.61□□□□□ -0.07
CKS1B-202ENST00000368436 PDYNP01213 254 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms