RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 CA3P07451 260 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 HIST1H1TP22492 207 aaPredicted RBP17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 CERS1P27544 350 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 SEC13P55735 322 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 LIPKQ5VXJ0 399 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 DGLUCYQ7Z3D6 616 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 SUN3Q8TAQ9 357 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 TRNT1Q96Q11 434 aaKnown RBP17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 SLC6A17Q9H1V8 727 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 PRDM7Q9NQW5 492 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 PHPT1Q9NRX4 125 aaPredicted RBP17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 CFL2Q9Y281 166 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 F5P12259 2224 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 C5orf67F2Z3F1 127 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 RFXAPO00287 272 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 KCNK2O95069 426 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 FCARP24071 287 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 GSTM5P46439 218 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 GIPRP48546 466 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 TMED10P49755 219 aaKnown RBP17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 GPM6BQ13491 265 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 NCF4Q15080 339 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 FAM92BQ6ZTR7 304 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 LRR1Q96L50 414 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 CARD8Q9Y2G2 431 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 ASB4Q9Y574 426 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 TPTEP56180 551 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 RHAGQ02094 409 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 SGCGQ13326 291 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 MLC1Q15049 377 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 MFSD4BQ5TF39 518 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 TMEM203Q969S6 136 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 CEP19Q96LK0 163 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 FCRL4Q96PJ5 515 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 PITHD1Q9GZP4 211 aaPredicted RBP17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 SNTG1Q9NSN8 517 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 NDOR1Q9UHB4 597 aa17.05■□□□□ 0.32
UBQLN4-201ENST00000368309 CYP7B1O75881 506 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 CEACAM5P06731 702 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 HOXC5Q00444 222 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 MLLT1Q03111 559 aaPredicted RBP17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 ABHD17CQ6PCB6 329 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 ITPKCQ96DU7 683 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 PLA2G12AQ9BZM1 189 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 EGLN3Q9H6Z9 239 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 SP140LQ9H930 580 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 EHD3Q9NZN3 535 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 AIFM1O95831 613 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 ATP5A1P25705 553 aaKnown RBP17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 PCYT1AP49585 367 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 MXD1Q05195 221 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 TOR1AIP1Q5JTV8 583 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 TMEM201Q5SNT2 666 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 OR14C36Q8NHC7 312 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 BARHL1Q9BZE3 327 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 BTBD1Q9H0C5 482 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 GPR52Q9Y2T5 361 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 RWDD3Q9Y3V2 267 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 UGT2A1Q9Y4X1 527 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 LGI1O95970 557 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 PSMA1P25786 263 aaKnown RBP17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 KHKP50053 298 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 TRA2BP62995 288 aaKnown RBP17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 MAP4K2Q12851 820 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 LRRC32Q14392 662 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 DESI1Q6ICB0 168 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 RSPH9Q9H1X1 276 aaPredicted RBP17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 IGFLR1Q9H665 355 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 CPNE5Q9HCH3 593 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 USP34Q70CQ2 3546 aa17.04■□□□□ 0.32
UBQLN4-201ENST00000368309 NARSO43776 548 aaKnown RBP17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 SNRNP200O75643 2136 aaKnown RBP17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 PKLRP30613 574 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 TIE1P35590 1138 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 CRYBB2P43320 205 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 ZIC1Q15915 447 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 SNAPC1Q16533 368 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 SYT14P1Q58G82 188 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 MEDAGQ5VYS4 303 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 NANOGP1Q8N7R0 232 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 ZNF513Q8N8E2 541 aaPredicted RBP17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 ZNF784Q8NCA9 323 aaPredicted RBP17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 KAT2AQ92830 837 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 ANKMY1Q9P2S6 941 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 SCN3AQ9NY46 2000 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 LOC110117498-PIK3R3F6TDL0 507 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 SLC31A1O15431 190 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 TNFSF8P32971 234 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 CDC20Q12834 499 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 TMEM35AQ53FP2 167 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 MORN4Q8NDC4 146 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 OR2L3Q8NG85 312 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 OR2L8Q8NGY9 312 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 MND1Q9BWT6 205 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 GPR55Q9Y2T6 319 aaPredicted RBP17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 MUC22E2RYF6 1773 aaPredicted RBP17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 A0A1W2PQU0 124 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 LRRTM2O43300 516 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 SSX4O60224 188 aa17.03■□□□□ 0.32
UBQLN4-201ENST00000368309 MC3RP41968 323 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms