RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 PPP2R2DQ66LE6 453 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 SLC36A4Q6YBV0 504 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 HSDL2Q6YN16 418 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 USP30Q70CQ3 517 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 WDR53Q7Z5U6 358 aaPredicted RBP13.48□□□□□ -0.25
CD48-201ENST00000368045 IQCHQ86VS3 1027 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 LINC01555Q8NAE3 123 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 TP53I13Q8NBR0 393 aaPredicted RBP13.48□□□□□ -0.25
CD48-201ENST00000368045 OR5D16Q8NGK9 328 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 OR2L8Q8NGY9 312 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 TMEM163Q8TC26 289 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 MSLNLQ96KJ4 702 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 LRR1Q96L50 414 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 WFDC6Q9BQY6 131 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 C11orf49Q9H6J7 331 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 ERVK13-1Q9NX77 482 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 CALML5Q9NZT1 146 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 FBXW2Q9UKT8 454 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 EXOSC1Q9Y3B2 195 aaKnown RBP13.48□□□□□ -0.25
CD48-201ENST00000368045 RWDD3Q9Y3V2 267 aa13.48□□□□□ -0.25
CD48-201ENST00000368045 LRRK1Q38SD2 2015 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 PRODHO43272 600 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 LCMT2O60294 686 aaKnown RBP13.47□□□□□ -0.25
CD48-201ENST00000368045 EPHX1P07099 455 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 FHP07954 510 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 CHRM4P08173 479 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 NR2F6P10588 404 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 MAGP20916 626 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 PKLRP30613 574 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 VIPR2P41587 438 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 OR2B6P58173 313 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 ABATP80404 500 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 TPBGQ13641 420 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 ZNF697Q5TEC3 545 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 MRM1Q6IN84 353 aaKnown RBP13.47□□□□□ -0.25
CD48-201ENST00000368045 SZRD1Q7Z422 152 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 LAPTM4BQ86VI4 370 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 COMTD1Q86VU5 262 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 UBQLNLQ8IYU4 475 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 IQCF1Q8N6M8 205 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 OR6T1Q8NGN1 323 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 TEX47Q8TBZ9 253 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 GPR151Q8TDV0 419 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 KIAA1143Q96AT1 154 aaPredicted RBP13.47□□□□□ -0.25
CD48-201ENST00000368045 TRMT61AQ96FX7 289 aaKnown RBP13.47□□□□□ -0.25
CD48-201ENST00000368045 FERD3LQ96RJ6 166 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 NELL2Q99435 816 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 C17orf62Q9BQA9 187 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 TIMM29Q9BSF4 260 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 SRRQ9GZT4 340 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 MIR1-1HGQ9H1L0 117 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 PRSS16Q9NQE7 514 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 TM7SF3Q9NS93 570 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 C14orf119Q9NWQ9 140 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 TXNL4BQ9NX01 149 aaKnown RBP13.47□□□□□ -0.25
CD48-201ENST00000368045 POU2F3Q9UKI9 436 aa13.47□□□□□ -0.25
CD48-201ENST00000368045 PTPRSQ13332 1948 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 IGLON5A6NGN9 336 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 KCNJ13O60928 360 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 CCNKO75909 580 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 EPPINO95925 133 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 KRT8P05787 483 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 TSPAN19P0C672 248 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 TRAPPC2P0DI81 140 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 TRAPPC2BP0DI82 140 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 AHRP35869 848 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 TSFMP43897 325 aaKnown RBP13.46□□□□□ -0.25
CD48-201ENST00000368045 GJA8P48165 433 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 MAN2A2P49641 1150 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 GPR50Q13585 617 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 PDGFRLQ15198 375 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 SNAPC1Q16533 368 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 PLK5Q496M5 336 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 MINDY4Q4G0A6 757 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 ARMC4Q5T2S8 1044 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 LIPKQ5VXJ0 399 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 ACSM5Q6NUN0 579 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 SLC27A4Q6P1M0 643 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 XKRXQ6PP77 449 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 ZNF793Q6ZN11 406 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 ADCK2Q7Z695 626 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 CELF2-AS1Q8N7Q2 184 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 AMER3Q8N944 861 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 OR2A1Q8NGT9 310 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 ERLEC1Q96DZ1 483 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 C12orf66Q96MD2 445 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 SLC38A2Q96QD8 506 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 ARHGDIGQ99819 225 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 LGR4Q9BXB1 951 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 SYNDIG1Q9H7V2 258 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 KCNK12Q9HB15 430 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 THAP10Q9P2Z0 257 aaPredicted RBP13.46□□□□□ -0.25
CD48-201ENST00000368045 PRKAG2Q9UGJ0 569 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 ENTPD4Q9Y227 616 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 LIPT1Q9Y234 373 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 ASB4Q9Y574 426 aa13.46□□□□□ -0.25
CD48-201ENST00000368045 NUP210Q8TEM1 1887 aaPredicted RBP13.46□□□□□ -0.26
CD48-201ENST00000368045 IGKV1-8A0A0C4DH67 115 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 SEC14L5O43304 696 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 UBXN7O94888 489 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms