RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 C16orf58Q96GQ5 468 aa11.65□□□□□ -0.54
PTPN7-202ENST00000367279 ART5Q96L15 291 aa11.65□□□□□ -0.54
PTPN7-202ENST00000367279 DEPDC7Q96QD5 511 aa11.65□□□□□ -0.54
PTPN7-202ENST00000367279 GPA33Q99795 319 aa11.65□□□□□ -0.54
PTPN7-202ENST00000367279 PLA2G12AQ9BZM1 189 aa11.65□□□□□ -0.54
PTPN7-202ENST00000367279 A4GNTQ9UNA3 340 aa11.65□□□□□ -0.54
PTPN7-202ENST00000367279 ICKQ9UPZ9 632 aa11.65□□□□□ -0.54
PTPN7-202ENST00000367279 HEATR5BQ9P2D3 2071 aa11.65□□□□□ -0.54
PTPN7-202ENST00000367279 TCF20Q9UGU0 1960 aaKnown RBP11.65□□□□□ -0.55
PTPN7-202ENST00000367279 TRPM6Q9BX84 2022 aa11.65□□□□□ -0.55
PTPN7-202ENST00000367279 IGLON5A6NGN9 336 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 SLC9A3R1O14745 358 aaPredicted RBP11.64□□□□□ -0.55
PTPN7-202ENST00000367279 CASKO14936 926 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 ERI3O43414 337 aaKnown RBP11.64□□□□□ -0.55
PTPN7-202ENST00000367279 PAPLNO95428 1278 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 FGBP02675 491 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 PIPP12273 146 aaPredicted RBP11.64□□□□□ -0.55
PTPN7-202ENST00000367279 HTR3AP46098 478 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 RNF144AP50876 292 aaPredicted RBP11.64□□□□□ -0.55
PTPN7-202ENST00000367279 RAB8AP61006 207 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 PSPHP78330 225 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 IFITM2Q01629 132 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 E2F2Q14209 437 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 C9orf64Q5T6V5 341 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 C12orf73Q69YU5 71 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 KIAA1161Q6NSJ0 714 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 TMEM107Q6UX40 140 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 LRRTM4Q86VH4 590 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 C12orf76Q8N812 135 aaPredicted RBP11.64□□□□□ -0.55
PTPN7-202ENST00000367279 PROKR2Q8NFJ6 384 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 RASSF5Q8WWW0 418 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 COL26A1Q96A83 441 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 ZNF582Q96NG8 517 aaPredicted RBP11.64□□□□□ -0.55
PTPN7-202ENST00000367279 FAM83CQ9BQN1 747 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 TMED9Q9BVK6 235 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 ZNF717Q9BY31 904 aaPredicted RBP11.64□□□□□ -0.55
PTPN7-202ENST00000367279 NDEL1Q9GZM8 345 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 KLHL31Q9H511 634 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 C3orf14Q9HBI5 128 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 MOV10Q9HCE1 1003 aaKnown RBP11.64□□□□□ -0.55
PTPN7-202ENST00000367279 DEC1Q9P2X7 70 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 KCNK6Q9Y257 313 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 LSM2Q9Y333 95 aaKnown RBP11.64□□□□□ -0.55
PTPN7-202ENST00000367279 DSPPQ9NZW4 1301 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 A0A075B6Q4 140 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 CXorf51AA0A1B0GTR3 108 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 A0A1W2PS29 197 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 HYKKA2RU49 373 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 ITGB7P26010 798 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 CD83Q01151 205 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 ZNF79Q15937 498 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 ZNF730Q6ZMV8 503 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 DOK4Q8TEW6 326 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 POF1BQ8WVV4 589 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 SUSD6Q92537 303 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 PPP1R16AQ96I34 528 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 FAM46AQ96IP4 442 aaKnown RBP11.64□□□□□ -0.55
PTPN7-202ENST00000367279 V9GYH0 126 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 DOCK9Q9BZ29 2069 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 FAM170BA6NMN3 283 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 ADH1CP00326 375 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 GNRH1P01148 92 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 HMGN2P05204 90 aaKnown RBP11.64□□□□□ -0.55
PTPN7-202ENST00000367279 DDX6P26196 483 aaKnown RBP eCLIP11.64□□□□□ -0.55
PTPN7-202ENST00000367279 RACK1P63244 317 aaKnown RBP11.64□□□□□ -0.55
PTPN7-202ENST00000367279 DBPQ10586 325 aaPredicted RBP11.64□□□□□ -0.55
PTPN7-202ENST00000367279 MLLT11Q13015 90 aaPredicted RBP11.64□□□□□ -0.55
PTPN7-202ENST00000367279 SLAMF1Q13291 335 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 OR4C11Q6IEV9 310 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 UBQLNLQ8IYU4 475 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 ENKURQ8TC29 256 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 APOBEC4Q8WW27 367 aaKnown RBP11.64□□□□□ -0.55
PTPN7-202ENST00000367279 KCTD7Q96MP8 289 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 NDUFB11Q9NX14 153 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 NUFIP1Q9UHK0 495 aaKnown RBP11.64□□□□□ -0.55
PTPN7-202ENST00000367279 CLCA2Q9UQC9 943 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 LRRK1Q38SD2 2015 aa11.64□□□□□ -0.55
PTPN7-202ENST00000367279 SCN2AQ99250 2005 aa11.63□□□□□ -0.55
PTPN7-202ENST00000367279 MEIOCA2RUB1 952 aa11.63□□□□□ -0.55
PTPN7-202ENST00000367279 ARRDC5A6NEK1 342 aa11.63□□□□□ -0.55
PTPN7-202ENST00000367279 NCR1O76036 304 aa11.63□□□□□ -0.55
PTPN7-202ENST00000367279 RPN2P04844 631 aa11.63□□□□□ -0.55
PTPN7-202ENST00000367279 HOXB3P14651 431 aaPredicted RBP11.63□□□□□ -0.55
PTPN7-202ENST00000367279 DDX5P17844 614 aaKnown RBP11.63□□□□□ -0.55
PTPN7-202ENST00000367279 INPP1P49441 399 aa11.63□□□□□ -0.55
PTPN7-202ENST00000367279 SMSP52788 366 aa11.63□□□□□ -0.55
PTPN7-202ENST00000367279 ZNF658BQ4V348 819 aaPredicted RBP11.63□□□□□ -0.55
PTPN7-202ENST00000367279 ERN2Q76MJ5 926 aaKnown RBP11.63□□□□□ -0.55
PTPN7-202ENST00000367279 DTX3Q8N9I9 347 aa11.63□□□□□ -0.55
PTPN7-202ENST00000367279 GANCQ8TET4 914 aa11.63□□□□□ -0.55
PTPN7-202ENST00000367279 LHX9Q9NQ69 397 aa11.63□□□□□ -0.55
PTPN7-202ENST00000367279 SLC35C2Q9NQQ7 365 aa11.63□□□□□ -0.55
PTPN7-202ENST00000367279 KCNE3Q9Y6H6 103 aa11.63□□□□□ -0.55
PTPN7-202ENST00000367279 C17orf113A0A1B0GUU1 675 aa11.63□□□□□ -0.55
PTPN7-202ENST00000367279 SLC35F4A4IF30 521 aa11.63□□□□□ -0.55
PTPN7-202ENST00000367279 SLC30A4O14863 429 aa11.63□□□□□ -0.55
PTPN7-202ENST00000367279 PGRMC2O15173 223 aa11.63□□□□□ -0.55
PTPN7-202ENST00000367279 VEGFDO43915 354 aa11.63□□□□□ -0.55
PTPN7-202ENST00000367279 CHRM4P08173 479 aa11.63□□□□□ -0.55
PTPN7-202ENST00000367279 CISD3P0C7P0 127 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms