RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 HAGHQ16775 308 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 SHROOM1Q2M3G4 852 aaPredicted RBP2.56□□□□□ -2
RNU4-1-201ENST00000363925 TTC31Q49AM3 519 aaPredicted RBP2.56□□□□□ -2
RNU4-1-201ENST00000363925 MS4A13Q5J8X5 152 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 TAF3Q5VWG9 929 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 PRAMEF7Q5VXH5 474 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 NKAIN2Q5VXU1 208 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 MFSD7Q6UXD7 560 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 CCBE1Q6UXH8 406 aaPredicted RBP2.56□□□□□ -2
RNU4-1-201ENST00000363925 GPR142Q7Z601 462 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 TSEN54Q7Z6J9 526 aaKnown RBP2.56□□□□□ -2
RNU4-1-201ENST00000363925 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.56□□□□□ -2
RNU4-1-201ENST00000363925 MCOLN2Q8IZK6 566 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 SLC34A3Q8N130 599 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 CENPSQ8N2Z9 138 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 SFRP1Q8N474 314 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 C11orf42Q8N5U0 333 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 SPC24Q8NBT2 197 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 KRT35Q92764 455 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 BCL2L2Q92843 193 aaPredicted RBP2.56□□□□□ -2
RNU4-1-201ENST00000363925 HIST1H2ACQ93077 130 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 PTP4A1Q93096 173 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 SNX21Q969T3 373 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 NTNG2Q96CW9 530 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 SIGLEC12Q96PQ1 595 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 FAM173AQ9BQD7 235 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 JPH2Q9BR39 696 aaPredicted RBP2.56□□□□□ -2
RNU4-1-201ENST00000363925 ST6GALNAC5Q9BVH7 336 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 GPR174Q9BXC1 333 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 DEFB126Q9BYW3 111 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 NACA2Q9H009 215 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 DDX47Q9H0S4 455 aaKnown RBP2.56□□□□□ -2
RNU4-1-201ENST00000363925 TSPYL1Q9H0U9 437 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 TRPV6Q9H1D0 765 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 HPS4Q9NQG7 708 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 PNPLA3Q9NST1 481 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 DNAJC11Q9NVH1 559 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 IMPAD1Q9NX62 359 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 SENP1Q9P0U3 644 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 EMCNQ9ULC0 261 aa2.56□□□□□ -2
RNU4-1-201ENST00000363925 ZNF256Q9Y2P7 627 aaPredicted RBP2.56□□□□□ -2
RNU4-1-201ENST00000363925 CFAP65Q6ZU64 1925 aaKnown RBP2.56□□□□□ -2
RNU4-1-201ENST00000363925 TDRD6O60522 2096 aaKnown RBP2.56□□□□□ -2
RNU4-1-201ENST00000363925 IGHV3OR16-12A0A075B7B8 117 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 KLF18A0A0U1RQI7 1052 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 A8MX80 341 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 C11orf98E9PRG8 122 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 RTN2O75298 545 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 GOSR1O95249 250 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 OAS1P00973 400 aaKnown RBP2.55□□□□□ -2
RNU4-1-201ENST00000363925 SERPINF2P08697 491 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 GNSP15586 552 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 TMOD1P28289 359 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 SAA4P35542 130 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 ARHGDIBP52566 201 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 CASP9P55211 416 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 NLRP11P59045 1033 aaKnown RBP2.55□□□□□ -2
RNU4-1-201ENST00000363925 ARF5P84085 180 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 CCZ1BP86790 482 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 CCZ1P86791 482 aaPredicted RBP2.55□□□□□ -2
RNU4-1-201ENST00000363925 PAX2Q02962 417 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 CD47Q08722 323 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 C17orf67Q0P5P2 114 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 CLPPQ16740 277 aaPredicted RBP2.55□□□□□ -2
RNU4-1-201ENST00000363925 RHBDD2Q6NTF9 364 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 C2orf66Q6UXQ4 117 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 ZNF410Q86VK4 478 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 ZNF525Q8N782 197 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 Q8N9G6 341 aaPredicted RBP2.55□□□□□ -2
RNU4-1-201ENST00000363925 NEK11Q8NG66 645 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 LHX4Q969G2 390 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 PIWIL1Q96J94 861 aaKnown RBP2.55□□□□□ -2
RNU4-1-201ENST00000363925 B3GALT6Q96L58 329 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 CASD1Q96PB1 797 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 DEFB118Q96PH6 123 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 C19orf43Q9BQ61 176 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 TRIM9Q9C026 710 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 PIGVQ9NUD9 493 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 FAM153AQ9UHL3 310 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 FKBP7Q9Y680 259 aa2.55□□□□□ -2
RNU4-1-201ENST00000363925 MACROD2A1Z1Q3 448 aa2.54□□□□□ -2
RNU4-1-201ENST00000363925 MFSD2BA6NFX1 497 aa2.54□□□□□ -2
RNU4-1-201ENST00000363925 G3V3Y1 287 aa2.54□□□□□ -2
RNU4-1-201ENST00000363925 TLR4O00206 839 aa2.54□□□□□ -2
RNU4-1-201ENST00000363925 LCMT2O60294 686 aaKnown RBP2.54□□□□□ -2
RNU4-1-201ENST00000363925 SYNGR4O95473 234 aa2.54□□□□□ -2
RNU4-1-201ENST00000363925 ALPIP09923 528 aa2.54□□□□□ -2
RNU4-1-201ENST00000363925 DUX4L4P0CJ87 422 aa2.54□□□□□ -2
RNU4-1-201ENST00000363925 CD1EP15812 388 aa2.54□□□□□ -2
RNU4-1-201ENST00000363925 VCPP55072 806 aaKnown RBP2.54□□□□□ -2
RNU4-1-201ENST00000363925 KRT83P78385 493 aa2.54□□□□□ -2
RNU4-1-201ENST00000363925 CXCL6P80162 114 aa2.54□□□□□ -2
RNU4-1-201ENST00000363925 RPA4Q13156 261 aa2.54□□□□□ -2
RNU4-1-201ENST00000363925 NME3Q13232 169 aa2.54□□□□□ -2
RNU4-1-201ENST00000363925 EPC2Q52LR7 807 aa2.54□□□□□ -2
RNU4-1-201ENST00000363925 ZNF658Q5TYW1 1059 aaPredicted RBP2.54□□□□□ -2
RNU4-1-201ENST00000363925 ETFRF1Q6IPR1 90 aa2.54□□□□□ -2
RNU4-1-201ENST00000363925 CGB2Q6NT52 195 aa2.54□□□□□ -2
RNU4-1-201ENST00000363925 ADAMTSL5Q6ZMM2 481 aa2.54□□□□□ -2
RNU4-1-201ENST00000363925 GCNT7Q6ZNI0 430 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms