RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 MRPS14O60783 128 aaKnown RBP13.21□□□□□ -0.3
COL6A1-201ENST00000361866 SPNP16150 400 aa13.21□□□□□ -0.3
COL6A1-201ENST00000361866 GPX2P18283 190 aa13.21□□□□□ -0.3
COL6A1-201ENST00000361866 CBLP22681 906 aa13.21□□□□□ -0.3
COL6A1-201ENST00000361866 ACVR2AP27037 513 aa13.21□□□□□ -0.3
COL6A1-201ENST00000361866 GBX2P52951 348 aaPredicted RBP13.21□□□□□ -0.3
COL6A1-201ENST00000361866 SLAMF1Q13291 335 aa13.21□□□□□ -0.3
COL6A1-201ENST00000361866 FCRLBQ6BAA4 426 aa13.21□□□□□ -0.3
COL6A1-201ENST00000361866 KIAA1324Q6UXG2 1013 aaKnown RBP13.21□□□□□ -0.3
COL6A1-201ENST00000361866 SLITRK4Q8IW52 837 aa13.21□□□□□ -0.3
COL6A1-201ENST00000361866 ACBD7Q8N6N7 88 aa13.21□□□□□ -0.3
COL6A1-201ENST00000361866 OR2T35Q8NGX2 323 aa13.21□□□□□ -0.3
COL6A1-201ENST00000361866 OTUB2Q96DC9 234 aa13.21□□□□□ -0.3
COL6A1-201ENST00000361866 SPATA9Q9BWV2 254 aa13.21□□□□□ -0.3
COL6A1-201ENST00000361866 C11orf54Q9H0W9 315 aaPredicted RBP13.21□□□□□ -0.3
COL6A1-201ENST00000361866 RP1L1Q8IWN7 2480 aaPredicted RBP13.2□□□□□ -0.3
COL6A1-201ENST00000361866 CACNB4O00305 520 aaPredicted RBP13.2□□□□□ -0.3
COL6A1-201ENST00000361866 PAK4O96013 591 aaPredicted RBP13.2□□□□□ -0.3
COL6A1-201ENST00000361866 S100A9P06702 114 aaKnown RBP13.2□□□□□ -0.3
COL6A1-201ENST00000361866 GNSP15586 552 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 F8A1P23610 371 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 CMPK1P30085 196 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 LCN1P31025 176 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 AP3S2P59780 193 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 ATXN7L3Q14CW9 347 aaPredicted RBP13.2□□□□□ -0.3
COL6A1-201ENST00000361866 GPR19Q15760 415 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 PGBD2Q6P3X8 592 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 PAQR6Q6TCH4 344 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 ZNF783Q6ZMS7 281 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 CPOQ8IVL8 374 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 OR52P1PQ8NH57 321 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 ZNF480Q8WV37 535 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 OSTF1Q92882 214 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 PRR14Q9BWN1 585 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 QRSL1Q9H0R6 528 aaKnown RBP13.2□□□□□ -0.3
COL6A1-201ENST00000361866 FBXO8Q9NRD0 319 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 TMEFF2Q9UIK5 374 aaPredicted RBP13.2□□□□□ -0.3
COL6A1-201ENST00000361866 ZNFX1Q9P2E3 1918 aaKnown RBP13.2□□□□□ -0.3
COL6A1-201ENST00000361866 NRIP1P48552 1158 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 DUSP7Q16829 419 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 TMEM44Q2T9K0 475 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 LRRTM4Q86VH4 590 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 DCUN1D3Q8IWE4 304 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 LSM14AQ8ND56 463 aaKnown RBP13.2□□□□□ -0.3
COL6A1-201ENST00000361866 OR2T33Q8NG76 320 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 OR4E2Q8NGC2 313 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 ZIC5Q96T25 663 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 LINC00597Q9H2U6 94 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.2□□□□□ -0.3
COL6A1-201ENST00000361866 PLSCR3Q9NRY6 295 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 HCN3Q9P1Z3 774 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 DUXAA6NLW8 204 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 RNASET2O00584 256 aaKnown RBP13.2□□□□□ -0.3
COL6A1-201ENST00000361866 CD3GP09693 182 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 DDX6P26196 483 aaKnown RBP eCLIP13.2□□□□□ -0.3
COL6A1-201ENST00000361866 GIPRP48546 466 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 CSNK1DP48730 415 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 GRIN2CQ14957 1233 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 HLA-DQA1Q5Y7H0 255 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 SLC16A12Q6ZSM3 486 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 TMED4Q7Z7H5 227 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 RPLP0P6Q8NHW5 317 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 OR4K3Q96R72 315 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 CTRCQ99895 268 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 PCDHGA2Q9Y5H1 932 aa13.2□□□□□ -0.3
COL6A1-201ENST00000361866 MT-ND5P03915 603 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 PITPNAQ00169 270 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 TOR1AIP1Q5JTV8 583 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 FAM205BPQ63HN1 556 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 BHLHA9Q7RTU4 235 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 CHST4Q8NCG5 386 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 OR5AR1Q8NGP9 310 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 ZNF563Q8TA94 476 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 IRF7Q92985 503 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 PEPDP12955 493 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 ACADLP28330 430 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 BMP8BP34820 402 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 STXBP1P61764 594 aaKnown RBP13.19□□□□□ -0.3
COL6A1-201ENST00000361866 TLE2Q04725 743 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 FLYWCH1Q4VC44 716 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 ZMAT1Q5H9K5 638 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 C1QTNF12Q5T7M4 302 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 SLC8B1Q6J4K2 584 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 PODNL1Q6PEZ8 512 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 GDPGP1Q6ZNW5 385 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 BMP8AQ7Z5Y6 402 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 HORMAD2Q8N7B1 307 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 HYLS1Q96M11 299 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 CDADC1Q9BWV3 514 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 PCBD2Q9H0N5 130 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 TAS2R10Q9NYW0 307 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 DPP7Q9UHL4 492 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 YARS2Q9Y2Z4 477 aaKnown RBP13.19□□□□□ -0.3
COL6A1-201ENST00000361866 KLK4Q9Y5K2 254 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 SNX11Q9Y5W9 270 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 TEX13CA0A0J9YWL9 993 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 KMOO15229 486 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 FLRT2O43155 660 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 FMO6PO60774 539 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 GRPRP30550 384 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms