RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 TOMM5Q8N4H5 51 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 OR52N2Q8NGI0 321 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 LRRC46Q96FV0 321 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 DUSP23Q9BVJ7 150 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 PRSS16Q9NQE7 514 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 PMF1-BGLAPU3KQ54 211 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 NUDT1P36639 197 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 DLX2Q07687 328 aaPredicted RBP17.65■□□□□ 0.42
CLIP2-202ENST00000361545 SERTAD2Q14140 314 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 RBM12BQ8IXT5 1001 aaKnown RBP17.65■□□□□ 0.42
CLIP2-202ENST00000361545 GSTO2Q9H4Y5 243 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 RPH3AQ9Y2J0 694 aaPredicted RBP17.65■□□□□ 0.42
CLIP2-202ENST00000361545 NAALAD2Q9Y3Q0 740 aa17.65■□□□□ 0.42
CLIP2-202ENST00000361545 CER1O95813 267 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 KLKB1P03952 638 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 F8A1P23610 371 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 FOXK1P85037 733 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 BNIP3Q12983 259 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 PDSS2Q86YH6 399 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 SECISBP2Q96T21 854 aaKnown RBP17.64■□□□□ 0.41
CLIP2-202ENST00000361545 SETD1AO15047 1707 aaKnown RBP17.64■□□□□ 0.41
CLIP2-202ENST00000361545 H3BSA7 217 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 TYSND1Q2T9J0 566 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 PLEKHG7Q6ZR37 379 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 DCP2Q8IU60 420 aaKnown RBP17.64■□□□□ 0.41
CLIP2-202ENST00000361545 GALNT15Q8N3T1 639 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 ACOT4Q8N9L9 421 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 A0A1W2PPK0 400 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 GPR37L1O60883 481 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 PRKCDQ05655 676 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 OCLNQ16625 522 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 GTF2IRD2BQ6EKJ0 949 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 GTF2IRD2Q86UP8 949 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 LHFPL3Q86UP9 236 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 NAGSQ8N159 534 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 NXPE2Q96DL1 559 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 MTHFD2LQ9H903 347 aaPredicted RBP17.64■□□□□ 0.41
CLIP2-202ENST00000361545 RDH14Q9HBH5 336 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 CCM2LQ9NUG4 571 aaPredicted RBP17.64■□□□□ 0.41
CLIP2-202ENST00000361545 IL20RAQ9UHF4 553 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 RNF6Q9Y252 685 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 F3P13726 295 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 FGL2Q14314 439 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 ZNF440Q8IYI8 595 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 KDM1BQ8NB78 822 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 PTTG2Q9NZH5 202 aa17.64■□□□□ 0.41
CLIP2-202ENST00000361545 SFTPDP35247 375 aa17.63■□□□□ 0.41
CLIP2-202ENST00000361545 RCAN2Q14206 197 aa17.63■□□□□ 0.41
CLIP2-202ENST00000361545 CLCA4Q14CN2 919 aa17.63■□□□□ 0.41
CLIP2-202ENST00000361545 THOC7Q6I9Y2 204 aaKnown RBP17.63■□□□□ 0.41
CLIP2-202ENST00000361545 GPR137CQ8N3F9 429 aa17.63■□□□□ 0.41
CLIP2-202ENST00000361545 ZNF559Q9BR84 538 aa17.63■□□□□ 0.41
CLIP2-202ENST00000361545 PISDQ9UG56 409 aa17.63■□□□□ 0.41
CLIP2-202ENST00000361545 SMAD9O15198 467 aaKnown RBP17.63■□□□□ 0.41
CLIP2-202ENST00000361545 UGDHO60701 494 aa17.63■□□□□ 0.41
CLIP2-202ENST00000361545 SNNO75324 88 aaPredicted RBP17.63■□□□□ 0.41
CLIP2-202ENST00000361545 MTRF1O75570 445 aaKnown RBP17.63■□□□□ 0.41
CLIP2-202ENST00000361545 UBE2Q1Q7Z7E8 422 aa17.63■□□□□ 0.41
CLIP2-202ENST00000361545 ZNF480Q8WV37 535 aa17.63■□□□□ 0.41
CLIP2-202ENST00000361545 ARRDC3Q96B67 414 aa17.63■□□□□ 0.41
CLIP2-202ENST00000361545 FAM46AQ96IP4 442 aaKnown RBP17.63■□□□□ 0.41
CLIP2-202ENST00000361545 OR6C2Q9NZP2 312 aa17.63■□□□□ 0.41
CLIP2-202ENST00000361545 MYH10P35580 1976 aa17.63■□□□□ 0.41
CLIP2-202ENST00000361545 A0A0G2JPF8 293 aa17.63■□□□□ 0.41
CLIP2-202ENST00000361545 GXYLT2A0PJZ3 443 aa17.63■□□□□ 0.41
CLIP2-202ENST00000361545 HNRNPCL3B7ZW38 293 aa17.63■□□□□ 0.41
CLIP2-202ENST00000361545 HNRNPCL4P0DMR1 293 aa17.63■□□□□ 0.41
CLIP2-202ENST00000361545 TMEM240Q5SV17 173 aa17.63■□□□□ 0.41
CLIP2-202ENST00000361545 RPL13AP3Q6NVV1 102 aa17.63■□□□□ 0.41
CLIP2-202ENST00000361545 SLITRK4Q8IW52 837 aa17.63■□□□□ 0.41
CLIP2-202ENST00000361545 WDR20Q8TBZ3 569 aa17.63■□□□□ 0.41
CLIP2-202ENST00000361545 CHFRQ96EP1 664 aa17.63■□□□□ 0.41
CLIP2-202ENST00000361545 RADILQ96JH8 1075 aa17.63■□□□□ 0.41
CLIP2-202ENST00000361545 CWH43Q9H720 699 aa17.63■□□□□ 0.41
CLIP2-202ENST00000361545 H3BML4 177 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 PLATP00750 562 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 CNPY1Q3B7I2 92 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 EEF1A1P5Q5VTE0 462 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 MS4A4EQ96PG1 132 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 CXXC1Q9P0U4 656 aaPredicted RBP17.62■□□□□ 0.41
CLIP2-202ENST00000361545 ATP6V1G1O75348 118 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 ZNF16P17020 682 aaPredicted RBP17.62■□□□□ 0.41
CLIP2-202ENST00000361545 NDUFV2P19404 249 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 PRLHRP49683 370 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 HK3P52790 923 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 NKAPLQ5M9Q1 402 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 PRAMEF17Q5VTA0 474 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 RFLNAQ6ZTI6 216 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 VWA5B2Q8N398 1253 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 PSD4Q8NDX1 1056 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 MAP3K3Q99759 626 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 IRF2BPLQ9H1B7 796 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 SLC6A17Q9H1V8 727 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 HS3ST2Q9Y278 367 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 FARSAQ9Y285 508 aaKnown RBP17.62■□□□□ 0.41
CLIP2-202ENST00000361545 PIGFQ07326 219 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 SLC44A3Q8N4M1 653 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 OR5T2Q8NGG2 359 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 TIMM29Q9BSF4 260 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 GLS2Q9UI32 602 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms