RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 PNMTP11086 282 aa19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 LTC4SQ16873 150 aa19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 CNIH3Q8TBE1 160 aa19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 C16orf78Q8WTQ4 265 aa19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 SSU72Q9NP77 194 aaKnown RBP19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 ZDHHC7Q9NXF8 308 aa19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 TMEM59LQ9UK28 342 aa19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 CCL26Q9Y258 94 aa19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 NAALAD2Q9Y3Q0 740 aa19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 LOC102723532A0A0G2JNH3 316 aa19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 PVALBP20472 110 aaPredicted RBP19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 CD38P28907 300 aa19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 TYSND1Q2T9J0 566 aa19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 OR52E1Q8NGJ3 308 aa19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 OR5D16Q8NGK9 328 aa19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 ELP5Q8TE02 316 aa19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 S100A16Q96FQ6 103 aaKnown RBP19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 DOHHQ9BU89 302 aa19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 RXFP3Q9NSD7 469 aa19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 NID2Q14112 1375 aa19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 WDPCPO95876 746 aa19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 ACY1Q03154 408 aa19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 ALG10BQ5I7T1 473 aa19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 C3orf58Q8NDZ4 430 aa19.31■□□□□ 0.68
CDC42BPB-201ENST00000361246 PCP4L1A6NKN8 68 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 ABCB7O75027 752 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 ACADVLP49748 655 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 CCDC36Q8IYA8 594 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 GALNT15Q8N3T1 639 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 RNF175Q8N4F7 328 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 OR52N2Q8NGI0 321 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 APIPQ96GX9 242 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 DPPA5A6NC42 116 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 MAP2K4P45985 399 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 TM4SF4P48230 202 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 EXOSC7Q15024 291 aaKnown RBP19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 ANKDD1AQ495B1 522 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 BCL2L15Q5TBC7 163 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 C7orf43Q8WVR3 580 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 SHISA4Q96DD7 197 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 MYH9P35579 1960 aaKnown RBP19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 GPR37L1O60883 481 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 HBQ1P09105 142 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 TUBG1P23258 451 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 HNRNPA0Q13151 305 aaKnown RBP19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 EIF4HQ15056 248 aaKnown RBP19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 RSU1Q15404 277 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 MOAP1Q96BY2 351 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 NEDD4LQ96PU5 975 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 CCDC59Q9P031 241 aaKnown RBP19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 M0R036 132 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 ZNF623O75123 536 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 MC3RP41968 323 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 SHHQ15465 462 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 CCDC107Q8WV48 283 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 SPO11Q9Y5K1 396 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 PPP1R3DO95685 299 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 LCATP04180 440 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 TAS2R38P59533 333 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 SCAPQ12770 1279 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 SEC23BQ15437 767 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 ASB9Q96DX5 294 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 PAPOLGQ9BWT3 736 aaKnown RBP19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 ITPAQ9BY32 194 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 GAREM1Q9H706 876 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 CD3GP09693 182 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 CTXN1P60606 82 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 SLC36A3Q495N2 470 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 SGTBQ96EQ0 304 aa19.3■□□□□ 0.68
CDC42BPB-201ENST00000361246 GPR143P51810 404 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 ADAM15Q13444 863 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 C6orf136Q5SQH8 315 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 NANOGP8Q6NSW7 305 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 PAMR1Q6UXH9 720 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 NANOGQ9H9S0 305 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 LIN28AQ9H9Z2 209 aaKnown RBP19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 TMPRSS11EQ9UL52 423 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 A8MV72 311 aaPredicted RBP19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 CDK3Q00526 305 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 RHDQ02161 417 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 APOFQ13790 326 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 CDNFQ49AH0 187 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 FBXO43Q4G163 708 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 MS4A4AQ96JQ5 239 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 VSX1Q9NZR4 365 aaPredicted RBP19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 TMEM5Q9Y2B1 443 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 CLDN25C9JDP6 229 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 GTF2F2P13984 249 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 DEFA5Q01523 94 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 FAM71F1Q96KD3 344 aaPredicted RBP19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 INPP5KQ9BT40 448 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 PDE4DIPQ5VU43 2346 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 FAM205BPQ63HN1 556 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 OR5T1Q8NG75 326 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 USP36Q9P275 1121 aaKnown RBP19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 SCAMP2O15127 329 aaKnown RBP19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 H6PDO95479 791 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 ITIH1P19827 911 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 UNC50Q53HI1 259 aa19.29■□□□□ 0.68
CDC42BPB-201ENST00000361246 PARS2Q7L3T8 475 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms