RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 RDH14Q9HBH5 336 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 COCHO43405 550 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 PKLRP30613 574 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 GRK5P34947 590 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 CLCN7P51798 805 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 CDC20Q12834 499 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 GPR17Q13304 367 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 USF2Q15853 346 aaPredicted RBP13.29□□□□□ -0.28
SMC5-201ENST00000361138 PSRC1Q6PGN9 363 aaPredicted RBP13.29□□□□□ -0.28
SMC5-201ENST00000361138 CNOT9Q92600 299 aaKnown RBP13.29□□□□□ -0.28
SMC5-201ENST00000361138 THRSPQ92748 146 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 C17orf62Q9BQA9 187 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 A3GALT2U3KPV4 340 aa13.29□□□□□ -0.28
SMC5-201ENST00000361138 F5H5P2 479 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 ARPC5O15511 151 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 DBIP07108 87 aaKnown RBP13.28□□□□□ -0.28
SMC5-201ENST00000361138 UCHL1P09936 223 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 LIPAP38571 399 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 FAPQ12884 760 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 CTU2Q2VPK5 515 aaKnown RBP13.28□□□□□ -0.28
SMC5-201ENST00000361138 C1orf189Q5VU69 101 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 OR5W2Q8NH69 310 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.28□□□□□ -0.28
SMC5-201ENST00000361138 NEK7Q8TDX7 302 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 RIT1Q92963 219 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 ATG5Q9H1Y0 275 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 UGDHO60701 494 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 SCGNO76038 276 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 BPIP17213 487 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 SOX2P48431 317 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 ART1P52961 327 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 INAVAQ3KP66 663 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 FAM69AQ5T7M9 428 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 PLBD1Q6P4A8 553 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 FAM122CQ6P4D5 195 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 LRRTM4Q86VH4 590 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 DCUN1D3Q8IWE4 304 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 MS4A15Q8N5U1 240 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 DNAJC5GQ8N7S2 189 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 DBF4BQ8NFT6 615 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 CYB5D2Q8WUJ1 264 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 USP3Q9Y6I4 520 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 SPDEFO95238 335 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 GNSP15586 552 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 RBMS1P29558 406 aaKnown RBP13.28□□□□□ -0.28
SMC5-201ENST00000361138 MAP4K2Q12851 820 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 MANEALQ5VSG8 457 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 CREB3L2Q70SY1 520 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 OR2L2Q8NH16 312 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 SNIP1Q8TAD8 396 aaKnown RBP13.28□□□□□ -0.28
SMC5-201ENST00000361138 TFGQ92734 400 aaPredicted RBP13.28□□□□□ -0.28
SMC5-201ENST00000361138 SLC28A3Q9HAS3 691 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 KCNK12Q9HB15 430 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 AKIP1Q9NQ31 210 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 OR6C74A6NCV1 312 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 IL12BP29460 328 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 WDR5P61964 334 aaKnown RBP13.28□□□□□ -0.28
SMC5-201ENST00000361138 RACK1P63244 317 aaKnown RBP13.28□□□□□ -0.28
SMC5-201ENST00000361138 DLK2Q6UY11 383 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 CCDC116Q8IYX3 515 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 ZSCAN1Q8NBB4 408 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 S100PBPQ96BU1 408 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 OR2M2Q96R28 347 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 ACTL7AQ9Y615 435 aa13.28□□□□□ -0.28
SMC5-201ENST00000361138 MROH6A6NGR9 719 aa13.27□□□□□ -0.28
SMC5-201ENST00000361138 SC5DO75845 299 aa13.27□□□□□ -0.28
SMC5-201ENST00000361138 PAK4O96013 591 aaPredicted RBP13.27□□□□□ -0.28
SMC5-201ENST00000361138 PET100P0DJ07 73 aa13.27□□□□□ -0.28
SMC5-201ENST00000361138 CCND3P30281 292 aaPredicted RBP13.27□□□□□ -0.28
SMC5-201ENST00000361138 PGDP52209 483 aa13.27□□□□□ -0.28
SMC5-201ENST00000361138 RAB8AP61006 207 aa13.27□□□□□ -0.28
SMC5-201ENST00000361138 NXPE4Q6UWF7 544 aa13.27□□□□□ -0.28
SMC5-201ENST00000361138 ARSKQ6UWY0 536 aa13.27□□□□□ -0.28
SMC5-201ENST00000361138 KIAA1324Q6UXG2 1013 aaKnown RBP13.27□□□□□ -0.28
SMC5-201ENST00000361138 TRAM1L1Q8N609 369 aa13.27□□□□□ -0.28
SMC5-201ENST00000361138 OR8K3Q8NH51 312 aa13.27□□□□□ -0.28
SMC5-201ENST00000361138 HRASLS5Q96KN8 279 aa13.27□□□□□ -0.28
SMC5-201ENST00000361138 C7orf50Q9BRJ6 194 aaKnown RBP13.27□□□□□ -0.28
SMC5-201ENST00000361138 QPCTLQ9NXS2 382 aa13.27□□□□□ -0.28
SMC5-201ENST00000361138 GRHPRQ9UBQ7 328 aa13.27□□□□□ -0.28
SMC5-201ENST00000361138 LRP5O75197 1615 aa13.27□□□□□ -0.28
SMC5-201ENST00000361138 NAP1L6A6NFF2 107 aa13.27□□□□□ -0.28
SMC5-201ENST00000361138 NAA10P41227 235 aaPredicted RBP13.27□□□□□ -0.28
SMC5-201ENST00000361138 BTN1A1Q13410 526 aa13.27□□□□□ -0.28
SMC5-201ENST00000361138 OCLNQ16625 522 aa13.27□□□□□ -0.28
SMC5-201ENST00000361138 FAM124AQ86V42 546 aa13.27□□□□□ -0.28
SMC5-201ENST00000361138 NUP43Q8NFH3 380 aa13.27□□□□□ -0.28
SMC5-201ENST00000361138 SH3RF2Q8TEC5 729 aa13.27□□□□□ -0.28
SMC5-201ENST00000361138 THAP4Q8WY91 577 aa13.27□□□□□ -0.28
SMC5-201ENST00000361138 C11orf54Q9H0W9 315 aaPredicted RBP13.27□□□□□ -0.28
SMC5-201ENST00000361138 GLTPQ9NZD2 209 aa13.27□□□□□ -0.28
SMC5-201ENST00000361138 ERVK-25P63136 954 aa13.27□□□□□ -0.29
SMC5-201ENST00000361138 ARFRP1Q13795 201 aa13.27□□□□□ -0.29
SMC5-201ENST00000361138 TOMM20Q15388 145 aa13.27□□□□□ -0.29
SMC5-201ENST00000361138 METAP1DQ6UB28 335 aaPredicted RBP13.27□□□□□ -0.29
SMC5-201ENST00000361138 OR2AJ1Q8NGZ0 328 aa13.27□□□□□ -0.29
SMC5-201ENST00000361138 OR52P1PQ8NH57 321 aa13.27□□□□□ -0.29
SMC5-201ENST00000361138 CNN2Q99439 309 aaKnown RBP13.27□□□□□ -0.29
SMC5-201ENST00000361138 ALG8Q9BVK2 526 aa13.27□□□□□ -0.29
SMC5-201ENST00000361138 HSFX1Q9UBD0 423 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms