RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 ACY1Q03154 408 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 INCA1Q0VD86 236 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 RABL3Q5HYI8 236 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 DCP2Q8IU60 420 aaKnown RBP9.25□□□□□ -0.93
CUX1-203ENST00000360264 TANKQ92844 425 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 NGBQ9NPG2 151 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 CUTCQ9NTM9 273 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 TMEM100Q9NV29 134 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 ZFC3H1O60293 1989 aaKnown RBP9.25□□□□□ -0.93
CUX1-203ENST00000360264 F5H0A9 414 aaPredicted RBP9.25□□□□□ -0.93
CUX1-203ENST00000360264 LEPRP48357 1165 aaKnown RBP9.25□□□□□ -0.93
CUX1-203ENST00000360264 RPA4Q13156 261 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 CARTPTQ16568 116 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 UGT2A3Q6UWM9 527 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 OR14K1Q8NGZ2 314 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 ACSL6Q9UKU0 697 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 HEMK1Q9Y5R4 338 aaPredicted RBP9.25□□□□□ -0.93
CUX1-203ENST00000360264 BHMG1C9JSJ3 638 aaPredicted RBP9.25□□□□□ -0.93
CUX1-203ENST00000360264 RBM12BQ8IXT5 1001 aaKnown RBP9.25□□□□□ -0.93
CUX1-203ENST00000360264 OR5P2Q8WZ92 322 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 ACSS2Q9NR19 701 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 MYO18BQ8IUG5 2567 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 PLSCR5A0PG75 271 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 CREB1P16220 341 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 OR4C11Q6IEV9 310 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 GPR149Q86SP6 731 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 NAT8LQ8N9F0 302 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 OR9K2Q8NGE7 335 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 OR52P1PQ8NH57 321 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 SLC35B2Q8TB61 432 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 DIO2Q92813 273 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 SCLYQ96I15 445 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 PIGVQ9NUD9 493 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 ZDHHC2Q9UIJ5 367 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 ZGRF1Q86YA3 2104 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 SLC6A8P48029 635 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 KCNQ1P51787 676 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 VSX2P58304 361 aaPredicted RBP9.25□□□□□ -0.93
CUX1-203ENST00000360264 TGFBIQ15582 683 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 SGCAQ16586 387 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 MOGQ16653 247 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 SH3D19Q5HYK7 790 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 TXNDC15Q96J42 360 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 OR14A2Q96R54 314 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 LPAR4Q99677 370 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 HIPK2Q9H2X6 1198 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 B4GALT6Q9UBX8 382 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 C9IYK1 514 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 FAM227AF5H4B4 570 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 MSX1P28360 303 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 TTLL10Q6ZVT0 673 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 IGSF21Q96ID5 467 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 NAP1L6A6NFF2 107 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 RPS2P15880 293 aaKnown RBP9.25□□□□□ -0.93
CUX1-203ENST00000360264 RHDQ02161 417 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 ARHGAP1Q07960 439 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 NSDHLQ15738 373 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 EBF4Q9BQW3 602 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 MON2Q7Z3U7 1717 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 RNF212BA8MTL3 300 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 PRKYO43930 277 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 SOX14O95416 240 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 CER1O95813 267 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 ALDH3B2P48448 385 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 TAS2R38P59533 333 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.25□□□□□ -0.93
CUX1-203ENST00000360264 UPRTQ96BW1 309 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 PTHP01270 115 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 PRKXP51817 358 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 DEFB134Q4QY38 66 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 MPP7Q5T2T1 576 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 OR2T4Q8NH00 348 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 BCAS3Q9H6U6 928 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 WDR37Q9Y2I8 494 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 TRAV6A0A075B6T7 132 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 A6NIZ1 184 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 DRD1P21728 446 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 RAP1BP61224 184 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 RAP1AP62834 184 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 SPANXN4Q5MJ08 99 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 KLHDC10Q6PID8 442 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 ENKD1Q9H0I2 346 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 TSPAN10Q9H1Z9 355 aaPredicted RBP9.25□□□□□ -0.93
CUX1-203ENST00000360264 EVA1AQ9H8M9 152 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 SARDHQ9UL12 918 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 IGLV3-22A0A075B6J6 115 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 FOXN2P32314 431 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 SSTP61278 116 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 MADCAM1Q13477 382 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 CAMK2DQ13557 499 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 GINS1Q14691 196 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 RTL6Q6ICC9 239 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 METTL25Q8N6Q8 603 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 RNF128Q8TEB7 428 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 UBE2J1Q9Y385 318 aaPredicted RBP9.24□□□□□ -0.93
CUX1-203ENST00000360264 SFTPBP07988 381 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 MAGEA3P43357 314 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 UPP1Q16831 310 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 LRIT3Q3SXY7 679 aa9.24□□□□□ -0.93
CUX1-203ENST00000360264 METTL2BQ6P1Q9 378 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms