RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 REP15Q6BDI9 236 aa11.55□□□□□ -0.56
NIF3L1-201ENST00000359683 PLAG1Q6DJT9 500 aa11.55□□□□□ -0.56
NIF3L1-201ENST00000359683 ZNF621Q6ZSS3 439 aa11.55□□□□□ -0.56
NIF3L1-201ENST00000359683 ZNF615Q8N8J6 731 aa11.55□□□□□ -0.56
NIF3L1-201ENST00000359683 PCYOX1LQ8NBM8 494 aa11.55□□□□□ -0.56
NIF3L1-201ENST00000359683 B3GNT7Q8NFL0 401 aa11.55□□□□□ -0.56
NIF3L1-201ENST00000359683 OR7G1Q8NGA0 311 aa11.55□□□□□ -0.56
NIF3L1-201ENST00000359683 OR1N1Q8NGS0 311 aa11.55□□□□□ -0.56
NIF3L1-201ENST00000359683 THAP4Q8WY91 577 aa11.55□□□□□ -0.56
NIF3L1-201ENST00000359683 SLC39A7Q92504 469 aa11.55□□□□□ -0.56
NIF3L1-201ENST00000359683 MOAP1Q96BY2 351 aa11.55□□□□□ -0.56
NIF3L1-201ENST00000359683 BBC3Q96PG8 261 aaPredicted RBP11.55□□□□□ -0.56
NIF3L1-201ENST00000359683 NPAS2Q99743 824 aa11.55□□□□□ -0.56
NIF3L1-201ENST00000359683 EFCAB1Q9HAE3 211 aa11.55□□□□□ -0.56
NIF3L1-201ENST00000359683 C3orf14Q9HBI5 128 aa11.55□□□□□ -0.56
NIF3L1-201ENST00000359683 SLC6A13Q9NSD5 602 aa11.55□□□□□ -0.56
NIF3L1-201ENST00000359683 FBXL4Q9UKA2 621 aa11.55□□□□□ -0.56
NIF3L1-201ENST00000359683 VPS4AQ9UN37 437 aa11.55□□□□□ -0.56
NIF3L1-201ENST00000359683 ERVK-19Q9WJR5 959 aa11.55□□□□□ -0.56
NIF3L1-201ENST00000359683 PCDHB14Q9Y5E9 798 aa11.55□□□□□ -0.56
NIF3L1-201ENST00000359683 TRBV5-3A0A0A0MS03 114 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 NSG1A0A0A6YYJ2 146 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 CDC14CA4D256 554 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 MRASO14807 208 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 KCNH1O95259 989 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 PSMG1O95456 288 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 CBX6O95503 412 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 GSNP06396 782 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 SSTR4P31391 388 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 SLC37A1P57057 533 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 DUSP8Q13202 625 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 ATP1A4Q13733 1029 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 EXT1Q16394 746 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 AMER2Q8N7J2 671 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 ZNF321PQ8N8H1 164 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 APCDD1LQ8NCL9 501 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 SIMC1Q8NDZ2 872 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 M1APQ8TC57 530 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 SFXN5Q8TD22 340 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 RCN3Q96D15 328 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 FAM120BQ96EK7 910 aaKnown RBP11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 CNPPD1Q9BV87 410 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 NUDT9Q9BW91 350 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 OR8D2Q9GZM6 311 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 EPS8L2Q9H6S3 715 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 ANKRA2Q9H9E1 313 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 SLC25A37Q9NYZ2 338 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 SNX8Q9Y5X2 465 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 GMEB1Q9Y692 573 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 PTPRQQ9UMZ3 2332 aa11.54□□□□□ -0.56
NIF3L1-201ENST00000359683 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 AIM2O14862 343 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 UBOX5O94941 541 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 ANP32DO95626 131 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 ICAM2P13598 275 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 ITPKBP27987 946 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 EMDP50402 254 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 PRR5P85299 388 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 TLE3Q04726 772 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 GAB1Q13480 694 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 NFYCQ13952 458 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 EXOSC7Q15024 291 aaKnown RBP11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 GTDC1Q4AE62 458 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 ATP1A1-AS1Q5TC04 95 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 HACD2Q6Y1H2 254 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 DHDDSQ86SQ9 333 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 MSRB3Q8IXL7 192 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 TRIML2Q8N7C3 387 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 NUP43Q8NFH3 380 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 OR52R1Q8NGF1 315 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 OR56A1Q8NGH5 318 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 ELP5Q8TE02 316 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 ZFP90Q8TF47 636 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 NCLNQ969V3 563 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 ROPN1LQ96C74 230 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 LRRC58Q96CX6 371 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 GIMAP5Q96F15 307 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 VMP1Q96GC9 406 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 MAGED4Q96JG8 741 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 OR10A5Q9H207 317 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 ZNF160Q9HCG1 818 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 MMP25Q9NPA2 562 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 DDX18Q9NVP1 670 aaKnown RBP11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 VAPAQ9P0L0 249 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 ZNF223Q9UK11 482 aaPredicted RBP11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 LOC400499M0QZD8 3231 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 IGSF10Q6WRI0 2623 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 OR6C76A6NM76 312 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 EIF4E1BA6NMX2 242 aaKnown RBP11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 FXYD1O00168 92 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 ESRRAP11474 423 aaPredicted RBP11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 CALB2P22676 271 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 MNAT1P51948 309 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 Q0VFX4 171 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 CDC20Q12834 499 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 BTBD16Q32M84 506 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 TRMT5Q32P41 509 aaKnown RBP11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 SPDYE7PQ495Y7 208 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 RUNDC3AQ59EK9 446 aa11.53□□□□□ -0.56
NIF3L1-201ENST00000359683 DCAF10Q5QP82 559 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms