RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 CDC123O75794 336 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-202ENST00000359366 SEMA3DO95025 777 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 CAPNS1P04632 268 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 BCHEP06276 602 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 ALDH4A1P30038 563 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 GFERP55789 205 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 RPP38P78345 283 aaKnown RBP4.79□□□□□ -1.64
ATXN3-202ENST00000359366 BNIP3Q12983 259 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 RUNX2Q13950 521 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 SCARB2Q14108 478 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 KCNAB1Q14722 419 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 SLC9A5Q14940 896 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 HEPACAMQ14CZ8 416 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 KCNJ8Q15842 424 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 ZNF829Q3KNS6 432 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-202ENST00000359366 CYBRD1Q53TN4 286 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 NHSL2Q5HYW2 709 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 SNAP47Q5SQN1 464 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 CPZQ66K79 652 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 TRIM40Q6P9F5 258 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 CEACAM20Q6UY09 585 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 DCDC5Q6ZRR9 648 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 MSANTD1Q6ZTZ1 278 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 ASPGQ86U10 573 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 ADHFE1Q8IWW8 467 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 SLC38A6Q8IZM9 456 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 AMER2Q8N7J2 671 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 TEX19Q8NA77 164 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 PAPD5Q8NDF8 572 aaKnown RBP4.79□□□□□ -1.64
ATXN3-202ENST00000359366 TMEM52Q8NDY8 209 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 TTLQ8NG68 377 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 OR2L5Q8NG80 312 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 OR9A2Q8NGT5 310 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 SPPL2AQ8TCT8 520 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 UTP15Q8TED0 518 aaKnown RBP4.79□□□□□ -1.64
ATXN3-202ENST00000359366 TAMM41Q96BW9 452 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 NMD3Q96D46 503 aaKnown RBP4.79□□□□□ -1.64
ATXN3-202ENST00000359366 ARSGQ96EG1 525 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 C16orf58Q96GQ5 468 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 KCNC2Q96PR1 638 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 OR2A5Q96R48 311 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 BBS4Q96RK4 519 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 MNTQ99583 582 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 WFDC6Q9BQY6 131 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 QRSL1Q9H0R6 528 aaKnown RBP4.79□□□□□ -1.64
ATXN3-202ENST00000359366 MUC13Q9H3R2 512 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 LIN7BQ9HAP6 207 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 SDHAF3Q9NRP4 125 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 ANKMY1Q9P2S6 941 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 RHCGQ9UBD6 479 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 TRPC4Q9UBN4 977 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 ZNF282Q9UDV7 671 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-202ENST00000359366 RAB23Q9ULC3 237 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.79□□□□□ -1.64
ATXN3-202ENST00000359366 SNX7Q9UNH6 387 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 B3GNT3Q9Y2A9 372 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 MRPS17Q9Y2R5 130 aaKnown RBP4.79□□□□□ -1.64
ATXN3-202ENST00000359366 SIT1Q9Y3P8 196 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 KCNE3Q9Y6H6 103 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 ADAMTS9Q9P2N4 1935 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 CCDC163A0A0D9SF12 145 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 A0A1B0GVT2 93 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 A0A1W2PR77 199 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 OR2A25A4D2G3 310 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 G3V2T6 193 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 SGK494L7N484 410 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 CCNDBP1O95273 360 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 RASAL1O95294 804 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 MED26O95402 600 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 OR12D1P0DN82 309 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 UMPSP11172 480 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 ZNF16P17020 682 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-202ENST00000359366 CD27P26842 260 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 NDUFS1P28331 727 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 PIGAP37287 484 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 MC3RP41968 323 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 RPS9P46781 194 aaKnown RBP4.79□□□□□ -1.64
ATXN3-202ENST00000359366 FNTBP49356 437 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 CCT3P49368 545 aaKnown RBP4.79□□□□□ -1.64
ATXN3-202ENST00000359366 CHN2P52757 468 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 PCBP4P57723 403 aaKnown RBP4.79□□□□□ -1.64
ATXN3-202ENST00000359366 ABATP80404 500 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 ERV3-1Q14264 604 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 GANABQ14697 944 aaKnown RBP4.79□□□□□ -1.64
ATXN3-202ENST00000359366 LASP1Q14847 261 aaKnown RBP4.79□□□□□ -1.64
ATXN3-202ENST00000359366 KIR2DS3Q14952 304 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 SYPL1Q16563 259 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 AMZ1Q400G9 498 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 SPATS1Q496A3 300 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 ZC3H12BQ5HYM0 836 aaKnown RBP4.79□□□□□ -1.64
ATXN3-202ENST00000359366 GCNT6Q5T4J0 391 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 PRAMEF17Q5VTA0 474 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 TMEM26Q6ZUK4 368 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 BTN2A1Q7KYR7 527 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 C6orf120Q7Z4R8 191 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 CHERPQ8IWX8 916 aaKnown RBP4.79□□□□□ -1.64
ATXN3-202ENST00000359366 ARL14Q8N4G2 192 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 Q8N9G6 341 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-202ENST00000359366 CATSPER1Q8NEC5 780 aa4.79□□□□□ -1.64
ATXN3-202ENST00000359366 OR2I1PQ8NGU4 316 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms