RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 PTDSS1P48651 473 aaKnown RBP12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 MAPK10P53779 464 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 CASP9P55211 416 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 HSD17B7P56937 341 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 CDK6Q00534 326 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 CHRNB3Q05901 458 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 ZFP36L1Q07352 338 aaKnown RBP12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 STX4Q12846 297 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 SLC13A2Q13183 592 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 DSG2Q14126 1118 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 TRIP6Q15654 476 aaKnown RBP12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 SYT16Q17RD7 645 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 FAM98BQ52LJ0 330 aaKnown RBP12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 LRRC23Q53EV4 343 aaPredicted RBP12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 LCE2DQ5TA82 110 aaPredicted RBP12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 ARHGAP40Q5TG30 622 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 TNFAIP8L2Q6P589 184 aaPredicted RBP12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 BPHLQ86WA6 291 aaPredicted RBP12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 TMEM126BQ8IUX1 230 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 ZNF843Q8N446 348 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 HORMAD2Q8N7B1 307 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 AGBL5Q8NDL9 886 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 NUP43Q8NFH3 380 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 NFKBIDQ8NI38 313 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 FBXO30Q8TB52 745 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 ZNF675Q8TD23 568 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 KAT2AQ92830 837 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 SLCO4A1Q96BD0 722 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 MAGED4Q96JG8 741 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 OR1F2PQ96R84 312 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 PELOQ9BRX2 385 aaKnown RBP12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 VCX3BQ9H321 246 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 OR51I1Q9H343 314 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 YY1AP1Q9H869 796 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 ZNF304Q9HCX3 659 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 A4GALTQ9NPC4 353 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 DCAF13Q9NV06 445 aaKnown RBP12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 NTMQ9P121 344 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 DHCR7Q9UBM7 475 aaKnown RBP12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 TRPC4Q9UBN4 977 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 SAMD4AQ9UPU9 718 aaKnown RBP12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 MAU2Q9Y6X3 613 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 V9GYQ6 96 aa12.97□□□□□ -0.33
PDLIM5-203ENST00000359265 ZNF462Q96JM2 2506 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 A0A087WV62 115 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 C5orf58C9J3I9 102 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 HBQ1P09105 142 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 SLC35E2P0CK97 266 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 MATN1P21941 496 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 KDELR2P33947 212 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 VHLP40337 213 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 PRKAG1P54619 331 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 RPS26P62854 115 aaKnown RBP12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 IGLV3-21P80748 117 aaPredicted RBP12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 BIKQ13323 160 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 C16orf72Q14CZ0 275 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 CCDC157Q569K6 752 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 ZNF628Q5EBL2 1059 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 RHBDD2Q6NTF9 364 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 RNF111Q6ZNA4 994 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 MED25Q71SY5 747 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 METTL25Q8N6Q8 603 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 PAPD5Q8NDF8 572 aaKnown RBP12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 C7orf57Q8NEG2 295 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 ADCY4Q8NFM4 1077 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 MIPOL1Q8TD10 442 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 MAL2Q969L2 176 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 PPWD1Q96BP3 646 aaKnown RBP12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 SLC47A1Q96FL8 570 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 UBL7Q96S82 380 aaPredicted RBP12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 SEPHS2Q99611 448 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 YIPF2Q9BWQ6 316 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 STRADBQ9C0K7 418 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 SERHL2Q9H4I8 314 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 MAGIXQ9H6Y5 334 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 P2RX2Q9UBL9 471 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 RIMS3Q9UJD0 308 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 ZNF451Q9Y4E5 1061 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 MMACHCQ9Y4U1 282 aa12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 TMEM184BQ9Y519 407 aaPredicted RBP12.96□□□□□ -0.33
PDLIM5-203ENST00000359265 EFCAB7A8K855 629 aa12.95□□□□□ -0.34
PDLIM5-203ENST00000359265 J3QKU1 62 aa12.95□□□□□ -0.34
PDLIM5-203ENST00000359265 CASQ2O14958 399 aaPredicted RBP12.95□□□□□ -0.34
PDLIM5-203ENST00000359265 TIPRLO75663 272 aa12.95□□□□□ -0.34
PDLIM5-203ENST00000359265 ZNF682O95780 498 aa12.95□□□□□ -0.34
PDLIM5-203ENST00000359265 IFNA14P01570 189 aa12.95□□□□□ -0.34
PDLIM5-203ENST00000359265 HMGN2P05204 90 aaKnown RBP12.95□□□□□ -0.34
PDLIM5-203ENST00000359265 BCHEP06276 602 aa12.95□□□□□ -0.34
PDLIM5-203ENST00000359265 RAP2AP10114 183 aa12.95□□□□□ -0.34
PDLIM5-203ENST00000359265 OR1D4P47884 311 aa12.95□□□□□ -0.34
PDLIM5-203ENST00000359265 EEF1A2Q05639 463 aaKnown RBP12.95□□□□□ -0.34
PDLIM5-203ENST00000359265 SERTAD2Q14140 314 aa12.95□□□□□ -0.34
PDLIM5-203ENST00000359265 ELOAQ14241 798 aaKnown RBP12.95□□□□□ -0.34
PDLIM5-203ENST00000359265 LASP1Q14847 261 aaKnown RBP12.95□□□□□ -0.34
PDLIM5-203ENST00000359265 PRAMEF17Q5VTA0 474 aa12.95□□□□□ -0.34
PDLIM5-203ENST00000359265 REEP3Q6NUK4 255 aa12.95□□□□□ -0.34
PDLIM5-203ENST00000359265 ENPP6Q6UWR7 440 aa12.95□□□□□ -0.34
PDLIM5-203ENST00000359265 CCDC80Q76M96 950 aa12.95□□□□□ -0.34
PDLIM5-203ENST00000359265 PPP1R3BQ86XI6 285 aa12.95□□□□□ -0.34
PDLIM5-203ENST00000359265 ZC3H7AQ8IWR0 971 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms