RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 BOLLQ8N9W6 283 aaKnown RBP5.81□□□□□ -1.48
VPS13B-203ENST00000358544 IL17RDQ8NFM7 739 aa5.81□□□□□ -1.48
VPS13B-203ENST00000358544 TTTY10Q9BZA0 68 aa5.81□□□□□ -1.48
VPS13B-203ENST00000358544 MCCC2Q9HCC0 563 aa5.81□□□□□ -1.48
VPS13B-203ENST00000358544 KCNJ16Q9NPI9 418 aa5.81□□□□□ -1.48
VPS13B-203ENST00000358544 TXNL4BQ9NX01 149 aaKnown RBP5.81□□□□□ -1.48
VPS13B-203ENST00000358544 OR6C2Q9NZP2 312 aa5.81□□□□□ -1.48
VPS13B-203ENST00000358544 ANKRD28O15084 1053 aa5.81□□□□□ -1.48
VPS13B-203ENST00000358544 LIPAP38571 399 aa5.81□□□□□ -1.48
VPS13B-203ENST00000358544 MGAT3Q09327 533 aa5.81□□□□□ -1.48
VPS13B-203ENST00000358544 STEAP2Q8NFT2 490 aa5.81□□□□□ -1.48
VPS13B-203ENST00000358544 GPR25O00155 361 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 SLC16A6O15403 523 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 CLDN11O75508 207 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 SCGB1D1O95968 90 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 MBP02144 154 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 GJA5P36382 358 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 WNT4P56705 351 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 GRIK5Q16478 980 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 C21orf62-AS1Q17RA5 79 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 GPR149Q86SP6 731 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 ZFP82Q8N141 532 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 C1orf52Q8N6N3 182 aaKnown RBP5.8□□□□□ -1.48
VPS13B-203ENST00000358544 RAET1EQ8TD07 263 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 A0A1B0GVT2 93 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 WASH4PA8MWX3 477 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 PXT1Q8NFP0 134 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 PCDHA9Q9Y5H5 950 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 PCYT1BQ9Y5K3 369 aaPredicted RBP5.8□□□□□ -1.48
VPS13B-203ENST00000358544 ZCWPW2A0A1B0GU75 182 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 EFCAB7A8K855 629 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 SMIM10L2AP0DMW4 78 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 SMIM10L2BP0DMW5 78 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 PAX6P26367 422 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 AQP2P41181 271 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 BACE1P56817 501 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 VLDLRP98155 873 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 FPGSQ05932 587 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 ZNF252P-AS1Q0IIN9 211 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 HTR4Q13639 388 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 SYT6Q5T7P8 510 aaPredicted RBP5.8□□□□□ -1.48
VPS13B-203ENST00000358544 HBMQ6B0K9 141 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 TMEM248Q9NWD8 314 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 GTF2IRD1Q9UHL9 959 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 TMPRSS11EQ9UL52 423 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 PCDHB9Q9Y5E1 797 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 NRCAMQ92823 1304 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 SCAMP2O15127 329 aaKnown RBP5.8□□□□□ -1.48
VPS13B-203ENST00000358544 SLC6A6P31641 620 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 CSKP41240 450 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 LSSP48449 732 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 NDUFA6P56556 154 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 SORDQ00796 357 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 PRAMEF18Q5VWM3 479 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 ZFP57Q9NU63 452 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 FAM230AA0A1W2PPH8 454 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 FABP1P07148 127 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 MAGEB1P43366 347 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 PTH2RP49190 550 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 EMP3P54852 163 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 COTL1Q14019 142 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 GPR176Q14439 515 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 SLBPQ14493 270 aaKnown RBP eCLIP5.8□□□□□ -1.48
VPS13B-203ENST00000358544 OR4D1Q15615 310 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 PLEKHN1Q494U1 663 aaPredicted RBP5.8□□□□□ -1.48
VPS13B-203ENST00000358544 SLC35F1Q5T1Q4 408 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 SYPL2Q5VXT5 272 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 C18orf63Q68DL7 685 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 RAET1GQ6H3X3 334 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 C17orf107Q6ZR85 190 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 CEP68Q76N32 757 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 ZER1Q7Z7L7 766 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 ZNF680Q8NEM1 530 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 OR7D4Q8NG98 312 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 PIGVQ9NUD9 493 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 IMP3Q9NV31 184 aaKnown RBP5.8□□□□□ -1.48
VPS13B-203ENST00000358544 RBMXL2O75526 392 aaKnown RBP5.8□□□□□ -1.48
VPS13B-203ENST00000358544 ACVR1BP36896 505 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 BAK1Q16611 211 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 ABHD15Q6UXT9 468 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 RHEBL1Q8TAI7 183 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 YIPF6Q96EC8 236 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 GIMAP5Q96F15 307 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 SLC25A44Q96H78 314 aaPredicted RBP5.8□□□□□ -1.48
VPS13B-203ENST00000358544 RAD9AQ99638 391 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 SLC32A1Q9H598 525 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 GMPR2Q9P2T1 348 aaKnown RBP5.8□□□□□ -1.48
VPS13B-203ENST00000358544 FAM198AQ9UFP1 575 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 AKAIN1P0CW23 69 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 PIGAP37287 484 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 SLC10A2Q12908 348 aaPredicted RBP5.8□□□□□ -1.48
VPS13B-203ENST00000358544 FAM182BQ5T319 152 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 GLT8D1Q68CQ7 371 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 TRIM46Q7Z4K8 759 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 TCTE3Q8IZS6 198 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 PCSK9Q8NBP7 692 aaKnown RBP5.8□□□□□ -1.48
VPS13B-203ENST00000358544 ZNF248Q8NDW4 579 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 HMGB4Q8WW32 186 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 TMEM43Q9BTV4 400 aa5.8□□□□□ -1.48
VPS13B-203ENST00000358544 MAGEH1Q9H213 219 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms