RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 SIX3O95343 332 aaPredicted RBP3.78□□□□□ -1.8
CNGA1-201ENST00000358519 VNN2O95498 520 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 TGM6O95932 706 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 LALBAP00709 142 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 APOC3P02656 99 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 CYP17A1P05093 508 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 LTA4HP09960 611 aaKnown RBP3.78□□□□□ -1.8
CNGA1-201ENST00000358519 LINC00271P0C7V0 271 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 APEX1P27695 318 aaKnown RBP3.78□□□□□ -1.8
CNGA1-201ENST00000358519 NNMTP40261 264 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 EIF1P41567 113 aaKnown RBP3.78□□□□□ -1.8
CNGA1-201ENST00000358519 PTGER3P43115 390 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 PRKG2Q13237 762 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 GTF2H3Q13889 308 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 SSX1Q16384 188 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 GTDC1Q4AE62 458 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 FAM74A3Q4VXF1 159 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 ATP6AP1LQ52LC2 224 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 KLHL22Q53GT1 634 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 ARSJQ5FYB0 599 aaPredicted RBP3.78□□□□□ -1.8
CNGA1-201ENST00000358519 PABPC1L2AQ5JQF8 200 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 NHLRC3Q5JS37 347 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 ZNF648Q5T619 568 aaPredicted RBP3.78□□□□□ -1.8
CNGA1-201ENST00000358519 TRIQKQ629K1 86 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 KANK2Q63ZY3 851 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 RGS7BPQ6MZT1 257 aaPredicted RBP3.78□□□□□ -1.8
CNGA1-201ENST00000358519 NCEH1Q6PIU2 408 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 TMEM107Q6UX40 140 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 Q6ZPB1 254 aaPredicted RBP3.78□□□□□ -1.8
CNGA1-201ENST00000358519 SPATA19Q7Z5L4 167 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 RAB44Q7Z6P3 723 aaPredicted RBP3.78□□□□□ -1.8
CNGA1-201ENST00000358519 DNAJB7Q7Z6W7 309 aaPredicted RBP3.78□□□□□ -1.8
CNGA1-201ENST00000358519 SCN4BQ8IWT1 228 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 PYROXD2Q8N2H3 581 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 Q8N402 240 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 AVL9Q8NBF6 648 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 ZNF548Q8NEK5 533 aaPredicted RBP3.78□□□□□ -1.8
CNGA1-201ENST00000358519 OR11H7Q8NGC8 314 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 OR6P1Q8NGX9 317 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 OR2T4Q8NH00 348 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 PROKR1Q8TCW9 393 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 CREB3L4Q8TEY5 395 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 UBTD2Q8WUN7 234 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 NUDT8Q8WV74 236 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 ECHDC3Q96DC8 303 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 CRELD1Q96HD1 420 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 PPP1R16AQ96I34 528 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 LMLNQ96KR4 655 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 CXorf58Q96LI9 332 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 THUMPD3Q9BV44 507 aaKnown RBP3.78□□□□□ -1.8
CNGA1-201ENST00000358519 ERVK-6Q9BXR3 956 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 SLC29A3Q9BZD2 475 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 GABARAPL1Q9H0R8 117 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 ALG9Q9H6U8 611 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 NMUR1Q9HB89 426 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 FOLH1BQ9HBA9 442 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 DNAJC11Q9NVH1 559 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 BABAM2Q9NXR7 383 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 TAS2R16Q9NYV7 291 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 PDP1Q9P0J1 537 aaPredicted RBP3.78□□□□□ -1.8
CNGA1-201ENST00000358519 VAPAQ9P0L0 249 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 HCN3Q9P1Z3 774 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 MBD2Q9UBB5 411 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 ERVK-19Q9WJR5 959 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 NCKAP1Q9Y2A7 1128 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 CDH10Q9Y6N8 788 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 TRBV23-1A0A0A0MS06 115 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 TRBV5-4A0A0C4DH59 114 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 PRAMEF33A0A0G2JMD5 474 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 A0A1B0GTL3 188 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 ELOVL7A1L3X0 281 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 PMS2P1A4D2B8 440 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 TRABD2BA6NFA1 517 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 TUBAL3A6NHL2 446 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 LRRC14BA6NHZ5 514 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 M0R233 179 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 GTPBP1O00178 669 aaKnown RBP3.78□□□□□ -1.8
CNGA1-201ENST00000358519 CLDN5O00501 218 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 PDCD5O14737 125 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 KLK8O60259 260 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 LZTS3O60299 673 aaPredicted RBP3.78□□□□□ -1.8
CNGA1-201ENST00000358519 SELENOFO60613 162 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 UGDHO60701 494 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 HCN1O60741 890 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 PRAMEF10O60809 474 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 CREG1O75629 220 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 EIF3GO75821 320 aaKnown RBP eCLIP3.78□□□□□ -1.8
CNGA1-201ENST00000358519 OR4F21O95013 312 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 DIRAS1O95057 198 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 SCELO95171 688 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 WISP3O95389 354 aaPredicted RBP3.78□□□□□ -1.8
CNGA1-201ENST00000358519 POP4O95707 220 aaKnown RBP3.78□□□□□ -1.8
CNGA1-201ENST00000358519 SERPINA1P01009 418 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 HLA-DQB1P01920 261 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 C9P02748 559 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 IFI6P09912 130 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 CXCL3P19876 107 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 LPOP22079 712 aaPredicted RBP3.78□□□□□ -1.8
CNGA1-201ENST00000358519 SERPINA4P29622 427 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 OR1D2P34982 312 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms