RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 ARHGAP40Q5TG30 622 aa15.95■□□□□ 0.14
TPM1-205ENST00000357980 LPCAT4Q643R3 524 aa15.95■□□□□ 0.14
TPM1-205ENST00000357980 COX15Q7KZN9 410 aa15.95■□□□□ 0.14
TPM1-205ENST00000357980 BPHLQ86WA6 291 aaPredicted RBP15.95■□□□□ 0.14
TPM1-205ENST00000357980 PPP1R3BQ86XI6 285 aa15.95■□□□□ 0.14
TPM1-205ENST00000357980 OR10Q1Q8NGQ4 319 aa15.95■□□□□ 0.14
TPM1-205ENST00000357980 TAMM41Q96BW9 452 aa15.95■□□□□ 0.14
TPM1-205ENST00000357980 OTUB1Q96FW1 271 aaPredicted RBP15.95■□□□□ 0.14
TPM1-205ENST00000357980 TMEM19Q96HH6 336 aa15.95■□□□□ 0.14
TPM1-205ENST00000357980 NECTIN3Q9NQS3 549 aa15.95■□□□□ 0.14
TPM1-205ENST00000357980 SLC22A11Q9NSA0 550 aa15.95■□□□□ 0.14
TPM1-205ENST00000357980 ZNF639Q9UID6 485 aa15.95■□□□□ 0.14
TPM1-205ENST00000357980 ZNF451Q9Y4E5 1061 aa15.95■□□□□ 0.14
TPM1-205ENST00000357980 MMACHCQ9Y4U1 282 aa15.95■□□□□ 0.14
TPM1-205ENST00000357980 KIF26BQ2KJY2 2108 aa15.95■□□□□ 0.14
TPM1-205ENST00000357980 EFCAB7A8K855 629 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 ZNF682O95780 498 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 HOXB6P17509 224 aaKnown RBP15.94■□□□□ 0.14
TPM1-205ENST00000357980 S1PR1P21453 382 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 TGM1P22735 817 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 FASP25445 335 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 CCKBRP32239 447 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 STT3AP46977 705 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 CLCN2P51788 898 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 CYBRD1Q53TN4 286 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 QSOX2Q6ZRP7 698 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 AMIGO2Q86SJ2 522 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 VWA5B2Q8N398 1253 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 METTL25Q8N6Q8 603 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 DOK4Q8TEW6 326 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 XAGE5Q8WWM1 108 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 OR7D2Q96RA2 312 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 TACO1Q9BSH4 297 aaKnown RBP15.94■□□□□ 0.14
TPM1-205ENST00000357980 IGKV3D-11A0A0A0MRZ8 115 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 C4orf47A7E2U8 309 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 GDF9O60383 454 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 PGM3O95394 542 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 CBX7O95931 251 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 ATXN8OSP0DMR3 200 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 MAGEA2P43356 314 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 EFNA3P52797 238 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 MAPK10P53779 464 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 SERTAD2Q14140 314 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 ATP6AP1Q15904 470 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 SYPL1Q16563 259 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 ZNF385CQ66K41 422 aaPredicted RBP15.94■□□□□ 0.14
TPM1-205ENST00000357980 CDC73Q6P1J9 531 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 RBM44Q6ZP01 1051 aaKnown RBP15.94■□□□□ 0.14
TPM1-205ENST00000357980 VTCN1Q7Z7D3 282 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 GALNT12Q8IXK2 581 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 KBTBD2Q8IY47 623 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 RIT1Q92963 219 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 RBM18Q96H35 190 aaKnown RBP15.94■□□□□ 0.14
TPM1-205ENST00000357980 TREX2Q9BQ50 279 aaPredicted RBP15.94■□□□□ 0.14
TPM1-205ENST00000357980 YIPF2Q9BWQ6 316 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 SEMA6AQ9H2E6 1030 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 MKKSQ9NPJ1 570 aaPredicted RBP15.94■□□□□ 0.14
TPM1-205ENST00000357980 KCNE3Q9Y6H6 103 aa15.94■□□□□ 0.14
TPM1-205ENST00000357980 M0QX08 132 aa15.93■□□□□ 0.14
TPM1-205ENST00000357980 GALNSP34059 522 aa15.93■□□□□ 0.14
TPM1-205ENST00000357980 RORAP35398 523 aa15.93■□□□□ 0.14
TPM1-205ENST00000357980 RHAGQ02094 409 aa15.93■□□□□ 0.14
TPM1-205ENST00000357980 DUSP8Q13202 625 aa15.93■□□□□ 0.14
TPM1-205ENST00000357980 BIKQ13323 160 aa15.93■□□□□ 0.14
TPM1-205ENST00000357980 ILKQ13418 452 aa15.93■□□□□ 0.14
TPM1-205ENST00000357980 EXOSC7Q15024 291 aaKnown RBP15.93■□□□□ 0.14
TPM1-205ENST00000357980 LRRC36Q1X8D7 754 aa15.93■□□□□ 0.14
TPM1-205ENST00000357980 RPS26P11Q5JNZ5 115 aaPredicted RBP15.93■□□□□ 0.14
TPM1-205ENST00000357980 WDR53Q7Z5U6 358 aaPredicted RBP15.93■□□□□ 0.14
TPM1-205ENST00000357980 PATL1Q86TB9 770 aaKnown RBP15.93■□□□□ 0.14
TPM1-205ENST00000357980 SLC44A2Q8IWA5 706 aaPredicted RBP15.93■□□□□ 0.14
TPM1-205ENST00000357980 SLC16A11Q8NCK7 471 aa15.93■□□□□ 0.14
TPM1-205ENST00000357980 RNF31Q96EP0 1072 aa15.93■□□□□ 0.14
TPM1-205ENST00000357980 CENPNQ96H22 339 aaPredicted RBP15.93■□□□□ 0.14
TPM1-205ENST00000357980 HSH2DQ96JZ2 352 aa15.93■□□□□ 0.14
TPM1-205ENST00000357980 DGAT2Q96PD7 388 aa15.93■□□□□ 0.14
TPM1-205ENST00000357980 CDC6Q99741 560 aa15.93■□□□□ 0.14
TPM1-205ENST00000357980 SLC7A5P2Q9GIP4 190 aa15.93■□□□□ 0.14
TPM1-205ENST00000357980 TGIF2Q9GZN2 237 aa15.93■□□□□ 0.14
TPM1-205ENST00000357980 RUBCNLQ9H714 662 aa15.93■□□□□ 0.14
TPM1-205ENST00000357980 ADPRHL2Q9NX46 363 aa15.93■□□□□ 0.14
TPM1-205ENST00000357980 NCDNQ9UBB6 729 aa15.93■□□□□ 0.14
TPM1-205ENST00000357980 CTSFQ9UBX1 484 aa15.93■□□□□ 0.14
TPM1-205ENST00000357980 CCDC88CQ9P219 2028 aa15.93■□□□□ 0.14
TPM1-205ENST00000357980 IGLV3-12A0A075B6K2 115 aa15.92■□□□□ 0.14
TPM1-205ENST00000357980 FAM149AA5PLN7 773 aa15.92■□□□□ 0.14
TPM1-205ENST00000357980 C5orf58C9J3I9 102 aa15.92■□□□□ 0.14
TPM1-205ENST00000357980 SUV39H1O43463 412 aa15.92■□□□□ 0.14
TPM1-205ENST00000357980 SLC28A2O43868 658 aa15.92■□□□□ 0.14
TPM1-205ENST00000357980 PEX1O43933 1283 aa15.92■□□□□ 0.14
TPM1-205ENST00000357980 ONECUT2O95948 504 aa15.92■□□□□ 0.14
TPM1-205ENST00000357980 OPN1SWP03999 348 aa15.92■□□□□ 0.14
TPM1-205ENST00000357980 HBQ1P09105 142 aa15.92■□□□□ 0.14
TPM1-205ENST00000357980 MAP3K8P41279 467 aa15.92■□□□□ 0.14
TPM1-205ENST00000357980 SELENOWP63302 87 aa15.92■□□□□ 0.14
TPM1-205ENST00000357980 MC2RQ01718 297 aa15.92■□□□□ 0.14
TPM1-205ENST00000357980 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.92■□□□□ 0.14
TPM1-205ENST00000357980 NKAIN1Q4KMZ8 207 aa15.92■□□□□ 0.14
TPM1-205ENST00000357980 VWA2Q5GFL6 755 aa15.92■□□□□ 0.14
TPM1-205ENST00000357980 ANKFN1Q8N957 763 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms