RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 SLC30A3Q99726 388 aa14.16□□□□□ -0.14
CHD4-201ENST00000357008 HLA-EP13747 358 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 LMAN2Q12907 356 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 PAGE3Q5JUK9 113 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 CATSPEREQ5SY80 951 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 ZNF648Q5T619 568 aaPredicted RBP14.15□□□□□ -0.14
CHD4-201ENST00000357008 GALNT10Q86SR1 603 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 FAM217AQ8IXS0 508 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 NPLOC4Q8TAT6 608 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 WDR20Q8TBZ3 569 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 RAB7BQ96AH8 199 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 SLC2A11Q9BYW1 496 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 GSTO2Q9H4Y5 243 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 KCNK13Q9HB14 408 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 SERTAD3Q9UJW9 196 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 CEPT1Q9Y6K0 416 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 ZNF860A6NHJ4 632 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 C2orf74A8MZ97 194 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 SOD2P04179 222 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 CDK4P11802 303 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 WNT4P56705 351 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 DESI1Q6ICB0 168 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 C1orf94Q6P1W5 598 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 SPARTQ8N0X7 666 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 CNOT9Q92600 299 aaKnown RBP14.15□□□□□ -0.14
CHD4-201ENST00000357008 FAM46BQ96A09 425 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 AGPAT4Q9NRZ5 378 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 PHYHO14832 338 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 GK3PQ14409 553 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 MLIPQ5VWP3 458 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 TMEM225Q6GV28 225 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 NOXA1Q86UR1 476 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 ZSCAN1Q8NBB4 408 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 ARNTL2Q8WYA1 636 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 NINJ1Q92982 152 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 PBDC1Q9BVG4 233 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 RIMBP3CA6NJZ7 1639 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 RIMBP3BA6NNM3 1639 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 RIMBP3Q9UFD9 1639 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 FER1L4A9Z1Z3 1794 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 MANEALQ5VSG8 457 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 HMGN2P46Q86SG4 172 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 RASGRP3Q8IV61 690 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 ADGRG5Q8IZF4 528 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 ZNF649Q9BS31 505 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 HRASLS2Q9NWW9 162 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 A0A0G2JMP0 313 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 SSX5O60225 188 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 RIDAP52758 137 aaKnown RBP14.15□□□□□ -0.14
CHD4-201ENST00000357008 TAS2R38P59533 333 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 GSTM4Q03013 218 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 RGNQ15493 299 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 ZNF791Q3KP31 576 aaPredicted RBP14.15□□□□□ -0.14
CHD4-201ENST00000357008 LRFN4Q6PJG9 635 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 PIWIL3Q7Z3Z3 882 aaKnown RBP14.15□□□□□ -0.14
CHD4-201ENST00000357008 OR4M2Q8NGB6 313 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 FAM83CQ9BQN1 747 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 KCNK12Q9HB15 430 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 MEPEQ9NQ76 525 aaPredicted RBP14.15□□□□□ -0.14
CHD4-201ENST00000357008 GLS2Q9UI32 602 aa14.15□□□□□ -0.14
CHD4-201ENST00000357008 CD34P28906 385 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 CLDN10P78369 228 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 CRHR2Q13324 411 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 RAB11BQ15907 218 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 GKN2Q86XP6 184 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 TREX2Q9BQ50 279 aaPredicted RBP14.14□□□□□ -0.15
CHD4-201ENST00000357008 MVB12BQ9H7P6 319 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 SELENOWP63302 87 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 APOFQ13790 326 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 VEZF1Q14119 521 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 DHCR24Q15392 516 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 CGB2Q6NT52 195 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 GATSQ8NAP1 163 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 MAL2Q969L2 176 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 COQ10AQ96MF6 247 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 NMNAT1Q9HAN9 279 aaPredicted RBP14.14□□□□□ -0.15
CHD4-201ENST00000357008 ZNF226Q9NYT6 803 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 ADRB3P13945 408 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 PITPNBP48739 271 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 SOX4Q06945 474 aaPredicted RBP14.14□□□□□ -0.15
CHD4-201ENST00000357008 PLBD1Q6P4A8 553 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 DHRS4Q9BTZ2 278 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 SAV1Q9H4B6 383 aaPredicted RBP14.14□□□□□ -0.15
CHD4-201ENST00000357008 NOX1Q9Y5S8 564 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 IFNA1P01562 189 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 ADORA3P0DMS8 318 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 HOXB2P14652 356 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 TYRP1P17643 537 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 OR4C11Q6IEV9 310 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 P4HA3Q7Z4N8 544 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 DCP2Q8IU60 420 aaKnown RBP14.14□□□□□ -0.15
CHD4-201ENST00000357008 ZNF440Q8IYI8 595 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 GTPBP8Q8N3Z3 284 aaPredicted RBP14.14□□□□□ -0.15
CHD4-201ENST00000357008 TRMT10AQ8TBZ6 339 aaKnown RBP14.14□□□□□ -0.15
CHD4-201ENST00000357008 C16orf78Q8WTQ4 265 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 SLC25A44Q96H78 314 aaPredicted RBP14.14□□□□□ -0.15
CHD4-201ENST00000357008 FAM46AQ96IP4 442 aaKnown RBP14.14□□□□□ -0.15
CHD4-201ENST00000357008 ZNF559Q9BR84 538 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 PEAK1Q9H792 1746 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 CPED1A4D0V7 1026 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms