RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 ZNF436Q9C0F3 470 aaPredicted RBP10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 KCNJ16Q9NPI9 418 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 ADAM18Q9Y3Q7 739 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 ATRNL1Q5VV63 1379 aa10.55□□□□□ -0.72
GTF3C1-201ENST00000356183 MT-ND4P03905 459 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 MGST1P10620 155 aaKnown RBP10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 LAG3P18627 525 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 TAS2R20P59543 309 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 IGDCC3Q8IVU1 814 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 NUP43Q8NFH3 380 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 GAB3Q8WWW8 586 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 SEZ6LQ9BYH1 1024 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 TSPAN10Q9H1Z9 355 aaPredicted RBP10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 PPP4R1LQ9P1A2 415 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 SCML2Q9UQR0 700 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 PCDHB11Q9Y5F2 797 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 CD53P19397 219 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 SOX3P41225 446 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 PSPHP78330 225 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 PTCHD3Q3KNS1 767 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 C3P1Q6ZMU1 363 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 SORCS1Q8WY21 1168 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 TGM7Q96PF1 710 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 ACTL8Q9H568 366 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 IL20RAQ9UHF4 553 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 BACE2Q9Y5Z0 518 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 RPS10-NUDT3A0A1W2PQS6 291 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 VSTM5A8MXK1 200 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 SCO2O43819 266 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 PRKYO43930 277 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 TXNDC12O95881 172 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 MYF6P23409 242 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 DNAJB1P25685 340 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 RPS10P46783 165 aaKnown RBP10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 LILRA4P59901 499 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 ACY1Q03154 408 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 POU4F2Q12837 409 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 MAP4K2Q12851 820 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 COQ5Q5HYK3 327 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 HIST2H3PS2Q5TEC6 136 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 SLC22A10Q63ZE4 541 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 LEG1Q6P5S2 330 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 HACD2Q6Y1H2 254 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 ZFP82Q8N141 532 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 BBS10Q8TAM1 723 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 QRSL1Q9H0R6 528 aaKnown RBP10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 CXXC1Q9P0U4 656 aaPredicted RBP10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 COPS3Q9UNS2 423 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 A0A096LPI6 279 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 PRSS51A0A1B0GVH4 220 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 hCG_1807616A0A1W2PRN6 198 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 C9J4A7 227 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 SOX30O94993 753 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 NR2C1P13056 603 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 ZNF763Q0D2J5 394 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 NPRL3Q12980 569 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 CEACAM7Q14002 265 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 DPY19L2P1Q6NXN4 242 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 MEX3BQ6ZN04 569 aaKnown RBP10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 CILP2Q8IUL8 1156 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 TMIGD2Q96BF3 282 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 ZNF578Q96N58 590 aaPredicted RBP10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 GPR22Q99680 433 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 TMPRSS11EQ9UL52 423 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 MMP20O60882 483 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 PTPN2P17706 415 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 SERINC3Q13530 473 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 PLGLAQ15195 96 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 NDUFAF5Q5TEU4 345 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 CNIH2Q6PI25 160 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 TMIGD1Q6UXZ0 262 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 FBXO22Q8NEZ5 403 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 OR8J3Q8NGG0 315 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 OR2T35Q8NGX2 323 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 OR1S1Q8NH92 325 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 TGIF2Q9GZN2 237 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 TXNL4BQ9NX01 149 aaKnown RBP10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 MKS1Q9NXB0 559 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 TRAV18A0A075B6X5 111 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 FAM230AA0A1W2PPH8 454 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 H3BMQ9 156 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 HPGDSO60760 199 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 CPNE6O95741 557 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 PREPP48147 710 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 DIO3P55073 304 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 DNAJB13P59910 316 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 PRRT3Q5FWE3 981 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 PLBD1Q6P4A8 553 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 C15orf52Q6ZUT6 534 aaKnown RBP10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 OR5AK2Q8NH90 309 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 SNAPC3Q92966 411 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 RRNAD1Q96FB5 475 aaKnown RBP10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 COG8Q96MW5 612 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 TXN2Q99757 166 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 TCEAL7Q9BRU2 100 aa10.54□□□□□ -0.72
GTF3C1-201ENST00000356183 A6NLC8 198 aa10.53□□□□□ -0.72
GTF3C1-201ENST00000356183 SORBS2O94875 1100 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-201ENST00000356183 SNAPINO95295 136 aa10.53□□□□□ -0.72
GTF3C1-201ENST00000356183 SYNGR4O95473 234 aa10.53□□□□□ -0.72
GTF3C1-201ENST00000356183 CX3CR1P49238 355 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 266.4 ms